Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.182053	Ubqln1	ubiquilin 1	13	13 35.0 cM	56085
Gene Ontology	nucleus
Human Homolog	UBQLN1[ubiquilin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGCTCT (2) 13.1 0.0131 P8 Cb GC GCTCCTCCAA (8) 8.2 0.0082 P8 Cb GC TTTTCTTCCC (5) 3.3 0.0033 Cb medulloblastoma TGTGTGCTCT (2) 16.2 0.0162 Cb medulloblastoma GCTCCTCCAA (8) 2.3 0.0023 Cb medulloblastoma TTTTCTTCCC (5) 2.3 0.0023 P8 GC+1d culture TGTGTGCTCT (2) 17.1 0.0171 P8 GC+1d culture CATCAAACAC 6.8 0.0068 P8 GC+1d culture CAGCAGCCTC (7) 3.4 0.0034 P8 GC+1d culture GGATTCTTCG 2.3 0.0023 P8 GC+SHH+1d culture TGTGTGCTCT (2) 18.7 0.0187 P8 GC+SHH+1d culture CATCAAACAC 3.5 0.0035 P8 GC+SHH+1d culture TTTTCTTCCC (5) 2.3 0.0023 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture ACTGAGGAGG (4) 1.2 0.0012 P8 GC+SHH+1d culture AGCACCTCGG (4) 1.2 0.0012 P8 GC+SHH+1d culture CTCTCAAAAT (4) 1.2 0.0012 P8 GC+SHH+1d culture CTCTGATGTG (4) 1.2 0.0012 3T3 fibroblasts CAGGCGCTGC (4) 10.5 0.0105 3T3 fibroblasts TGTGTGCTCT (2) 7 0.007 E15 cortex CAGCAGCCTC (7) 4.9 0.0049 E15 cortex TGTGTGCTCT (2) 4.9 0.0049 P1 cortex TGTGTGCTCT (2) 13.6 0.0136 P1 cortex CTCTGATGTG (4) 4.5 0.0045 Hypothalamus TGTGTGCTCT (2) 9.1 0.0091 Hypothalamus CTCTGATGTG (4) 3.6 0.0036 Hypothalamus CAGCAGCCTC (7) 1.8 0.0018 Hypothalamus CTCTCAAAAT (4) 1.8 0.0018 E12.5 retina TGTGTGCTCT (2) 7.5 0.0075 E12.5 retina CATCAAACAC 3.8 0.0038 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina CTCTCAAAAT (4) 1.9 0.0019 E12.5 retina CTCTGATGTG (4) 1.9 0.0019 E14.5 retina TGTGTGCTCT (2) 7.3 0.0073 E14.5 retina CAGCAGCCTC (7) 1.8 0.0018 E14.5 retina CAGCAGCCTT (2) 1.8 0.0018 E16.5 retina CTCTGATGTG (4) 5.4 0.0054 E16.5 retina TTTTCTTCCC (5) 3.6 0.0036 E16.5 retina ACTGAGGAGG (4) 1.8 0.0018 E16.5 retina AGCACCTCGG (4) 1.8 0.0018 E16.5 retina CATCAAACAC 1.8 0.0018 E16.5 retina TGTGTGCTCT (2) 1.8 0.0018 E18.5 retina TGTGTGCTCT (2) 12.7 0.0127 E18.5 retina CACTTTTGCA (5) 1.8 0.0018 E18.5 retina CAGCAGCCTC (7) 1.8 0.0018 P0.5 retina CTCTGATGTG (4) 11.8 0.0118 P0.5 retina TGTGTGCTCT (2) 7.9 0.0079 P2.5 retina TGTGTGCTCT (2) 7 0.007 P2.5 retina CACTTTTGCA (5) 5.3 0.0053 P2.5 retina CATCAAACAC 3.5 0.0035 P2.5 retina CTCTGATGTG (4) 3.5 0.0035 P4.5 retina TGTGTGCTCT (2) 5.9 0.0059 P4.5 retina CTCTGATGTG (4) 4 0.004 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina CAGCAGCCTT (2) 2 0.002 P4.5 retina CTCTCAAATT (3) 2 0.002 P6.5 retina CTCTGATGTG (4) 6.7 0.0067 P6.5 retina TGTGTGCTCT (2) 5 0.005 P6.5 retina CTCTCAAATT (3) 3.3 0.0033 P6.5 retina CACTTTTGCA (5) 1.7 0.0017 P6.5 retina CAGCAGCCTC (7) 1.7 0.0017 P10.5 crx- retina CTCTCAAATT (3) 11.1 0.0111 P10.5 crx- retina TGTGTGCTCT (2) 5.6 0.0056 P10.5 crx- retina CTCTGATGTG (4) 3.7 0.0037 P10.5 crx- retina AGCACCTCGG (4) 1.9 0.0019 P10.5 crx- retina CAGGCGCTGC (4) 1.9 0.0019 P10.5 crx- retina CTCTCAAAAT (4) 1.9 0.0019 P10.5 crx+ retina TGTGTGCTCT (2) 17.3 0.0173 P10.5 crx+ retina CTCTCAAATT (3) 7.7 0.0077 P10.5 crx+ retina CTCTGATGTG (4) 5.8 0.0058 P10.5 crx+ retina ACTGAGGAGG (4) 1.9 0.0019 P10.5 crx+ retina CACTTTTGCA (5) 1.9 0.0019 P10.5 crx+ retina CATCAAACAC 1.9 0.0019 Adult retinal TGTGTGCTCT (2) 13 0.013 Adult retinal CTCTGATGTG (4) 11.1 0.0111 Adult retinal CTCTCAAATT (3) 5.6 0.0056 Adult retinal CAGGCGCTGC (4) 3.7 0.0037 Adult retinal CAGCAGCCTT (2) 1.9 0.0019 ONL CTCTCAAATT (3) 17.2 0.0172 ONL TGTGTGCTCT (2) 7.7 0.0077 ONL CAGCAGCCTC (7) 3.8 0.0038 ONL CTCTGATGTG (4) 1.9 0.0019 ONL GGATTCTTCG 1.9 0.0019