Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18210	Fbxo11	F-box protein 11	17		225055
Mm.18210	Msh6	mutS homolog 6 (E. coli)	17	17 47.0 cM	17688
Gene Ontology	ATP binding | damaged DNA binding | damaged DNA binding | determination of adult life span | DNA binding | DNA binding | DNA metabolism | DNA repair | induction of apoptosis by intracellular signals | mismatch repair | negative regulation of DNA recombination | response to UV | short patch mismatch repair system
Human Homolog	MSH6[mutS homolog 6 (E. coli)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAGAAAATG (3) 6.5 0.0065 P8 Cb GC CAAAGCATAA (3) 1.6 0.0016 P8 Cb GC GATGCTGTTA (7) 1.6 0.0016 Cb medulloblastoma TACCATAACA (6) 2.3 0.0023 P8 GC+1d culture TACCATAACA (6) 3.4 0.0034 P8 GC+1d culture CAAAGCATAA (3) 1.1 0.0011 P8 GC+1d culture GTAGAAAATG (3) 1.1 0.0011 P8 GC+SHH+1d culture TACCATAACA (6) 4.7 0.0047 P8 GC+SHH+1d culture CAAAGCATAA (3) 1.2 0.0012 P8 GC+SHH+1d culture CCTGGCTGCA (2) 1.2 0.0012 P1 cortex TACCATAACA (6) 9.1 0.0091 P1 cortex GATGCTGTTA (7) 4.5 0.0045 Hypothalamus TACCATAACA (6) 3.6 0.0036 E12.5 retina TACCATAACA (6) 5.6 0.0056 E14.5 retina TACCATAACA (6) 5.5 0.0055 E14.5 retina GATGCTGTTA (7) 1.8 0.0018 E16.5 retina TACCATAACA (6) 3.6 0.0036 E18.5 retina TTAAACAAAA (5) 5.5 0.0055 E18.5 retina TACCATAACA (6) 1.8 0.0018 P0.5 retina TACCATAACA (6) 5.9 0.0059 P0.5 retina GATGCTGTTA (7) 2 0.002 P2.5 retina TACCATAACA (6) 8.8 0.0088 P2.5 retina CCTGGCTGCA (2) 1.8 0.0018 P4.5 retina TACCATAACA (6) 5.9 0.0059 P4.5 retina CAAAGCATAA (3) 4 0.004 P6.5 retina GTAGAAAATG (3) 1.7 0.0017 P10.5 crx- retina GATGCTGTTA (7) 1.9 0.0019 Adult retinal GATGCTGTTA (7) 1.9 0.0019 Adult retinal GTAGAAAATG (3) 1.9 0.0019 ONL TACCATAACA (6) 3.8 0.0038 ONL CCTGGCTGCA (2) 1.9 0.0019 ONL GATGCTGTTA (7) 1.9 0.0019