Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18230	1300007B12Rik	RIKEN cDNA 1300007B12 gene	1		57439
Gene Ontology	integral to membrane
Human Homolog	C1orf37[chromosome 1 open reading frame 37]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGCAGGGGA (3) 8.2 0.0082 P8 Cb GC TAAAATTTGC 1.6 0.0016 P8 Cb GC TAATTTGCAT (4) 1.6 0.0016 Cb medulloblastoma GAGCAGGGGA (3) 18.5 0.0185 Cb medulloblastoma CAATTAAAAA (3) 2.3 0.0023 Cb medulloblastoma GAGAAGCTGG (10) 2.3 0.0023 P8 GC+1d culture GAGCAGGGGA (3) 8 0.008 P8 GC+1d culture TTGAAAGCAA (2) 5.7 0.0057 P8 GC+1d culture GAAGAACGTT 2.3 0.0023 P8 GC+1d culture CAGAGCCAGG (6) 1.1 0.0011 P8 GC+1d culture GGGTGGGGAA (9) 1.1 0.0011 P8 GC+SHH+1d culture GAGCAGGGGA (3) 9.4 0.0094 P8 GC+SHH+1d culture GAAGAACGTT 4.7 0.0047 P8 GC+SHH+1d culture TAAAATTTGC 2.3 0.0023 P8 GC+SHH+1d culture TTATCAGGGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGAAAGCAA (2) 1.2 0.0012 3T3 fibroblasts TAATTTGCAT (4) 17.5 0.0175 3T3 fibroblasts GAGCAGGGGA (3) 3.5 0.0035 E15 cortex GAGCAGGGGA (3) 9.9 0.0099 E15 cortex CAGAGCCAGG (6) 4.9 0.0049 E15 cortex GAAGAACGTT 4.9 0.0049 E15 cortex TTGAAAGCAA (2) 4.9 0.0049 P1 cortex CAATTAAAAA (3) 4.5 0.0045 Hypothalamus GAGCAGGGGA (3) 5.4 0.0054 Hypothalamus GAGAAGCTGG (10) 1.8 0.0018 E12.5 retina TTGAAAGCAA (2) 7.5 0.0075 E12.5 retina TTATCAGGGG (2) 5.6 0.0056 E12.5 retina GAAGAACGTT 1.9 0.0019 E12.5 retina GAGCAGGGGA (3) 1.9 0.0019 E12.5 retina GGGTGGGGAA (9) 1.9 0.0019 E14.5 retina GAGCAGGGGA (3) 14.6 0.0146 E14.5 retina TTATCAGGGG (2) 1.8 0.0018 E14.5 retina TTGAAAGCAG (2) 1.8 0.0018 E16.5 retina GAGCAGGGGA (3) 14.5 0.0145 E16.5 retina GCATCTTTTG (3) 3.6 0.0036 E16.5 retina GGGTGGGGAA (9) 1.8 0.0018 E18.5 retina GAGCAGGGGA (3) 7.3 0.0073 E18.5 retina CAATTAAAAA (3) 1.8 0.0018 E18.5 retina GAAGAACGTT 1.8 0.0018 P0.5 retina GAGCAGGGGA (3) 7.9 0.0079 P0.5 retina GAAGAACGTT 2 0.002 P2.5 retina GAGCAGGGGA (3) 12.3 0.0123 P2.5 retina TTGAAAGCAA (2) 3.5 0.0035 P2.5 retina GAAGAACGTT 1.8 0.0018 P2.5 retina GAGAAGCTGG (10) 1.8 0.0018 P2.5 retina TTATCAGGGG (2) 1.8 0.0018 P4.5 retina GAGCAGGGGA (3) 5.9 0.0059 P4.5 retina TAAAATTTGC 2 0.002 P4.5 retina TTGAAAGCAA (2) 2 0.002 P6.5 retina GAGCAGGGGA (3) 11.7 0.0117 P6.5 retina GGGTGGGGAA (9) 5 0.005 P6.5 retina CAATTAAAAA (3) 1.7 0.0017 P6.5 retina TTGAAAGCAA (2) 1.7 0.0017 P6.5 retina TTGAAAGCAG (2) 1.7 0.0017 P10.5 crx- retina GAGCAGGGGA (3) 7.4 0.0074 P10.5 crx- retina GAAGAACGTT 1.9 0.0019 P10.5 crx- retina GGGTGGGGAA (9) 1.9 0.0019 P10.5 crx- retina TAAAATTTGC 1.9 0.0019 P10.5 crx+ retina GAGCAGGGGA (3) 28.8 0.0288 P10.5 crx+ retina GGGTGGGGAA (9) 7.7 0.0077 P10.5 crx+ retina GAAGAACGTT 1.9 0.0019 P10.5 crx+ retina TTGAAAGCAA (2) 1.9 0.0019 Adult retinal CAGAGCCAGG (6) 1.9 0.0019 Adult retinal GAAGAACGTT 1.9 0.0019 Adult retinal GAGCAGGGGA (3) 1.9 0.0019 Adult retinal TTGAAAGCAA (2) 1.9 0.0019 ONL GGGTGGGGAA (9) 3.8 0.0038 ONL CAGAGCCAGG (6) 1.9 0.0019 ONL GAGAAGCTGG (10) 1.9 0.0019 ONL TTGAAAGCAA (2) 1.9 0.0019 ONL TTGAAAGCAG (2) 1.9 0.0019