Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.182396	Ltbp3	latent transforming growth factor beta binding protein 3	19	19 2.0 cM	16998
Gene Ontology	calcium ion binding | extracellular | extracellular matrix | extracellular space | growth factor binding | skeletal development | transforming growth factor beta receptor signaling pathway | transforming growth factor beta receptor signaling pathway
Human Homolog	LTBP3[latent transforming growth factor beta binding protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAGCCTGGT (3) 9.8 0.0098 P8 Cb GC GTTTGTACAA (2) 6.5 0.0065 P8 Cb GC AAGCTGGGAG (3) 1.6 0.0016 P8 Cb GC GACCCAAGGA (8) 1.6 0.0016 Cb medulloblastoma TGAGCCTGGT (3) 11.6 0.0116 Cb medulloblastoma GGAAAACCAC (5) 2.3 0.0023 Cb medulloblastoma GTTTGTACAA (2) 2.3 0.0023 P8 GC+1d culture TGAGCCTGGT (3) 10.3 0.0103 P8 GC+1d culture GTTTGTACAA (2) 2.3 0.0023 P8 GC+1d culture AAGCTGGGAG (3) 1.1 0.0011 P8 GC+1d culture GGCCCCTTGG (3) 1.1 0.0011 P8 GC+SHH+1d culture TGAGCCTGGT (3) 18.7 0.0187 P8 GC+SHH+1d culture GTTTGTACAA (2) 8.2 0.0082 P8 GC+SHH+1d culture GGAAAACCAC (5) 2.3 0.0023 P8 GC+SHH+1d culture AAGCTGGGAG (3) 1.2 0.0012 P8 GC+SHH+1d culture GACCCAAGGA (8) 1.2 0.0012 P8 GC+SHH+1d culture GGCCCCTTGG (3) 1.2 0.0012 3T3 fibroblasts TGAGCCTGGT (3) 21 0.021 3T3 fibroblasts GTTTGTACAA (2) 7 0.007 3T3 fibroblasts GGAAAACCAC (5) 3.5 0.0035 E15 cortex TGAGCCTGGT (3) 14.8 0.0148 E15 cortex GGAAAACCAC (5) 4.9 0.0049 P1 cortex TGAGCCTGGT (3) 4.5 0.0045 Hypothalamus TGAGCCTGGT (3) 12.7 0.0127 Hypothalamus AAGCTGGGAG (3) 5.4 0.0054 Hypothalamus GTTTGTACAA (2) 3.6 0.0036 Hypothalamus GACCCAAGGA (8) 1.8 0.0018 Hypothalamus GGAAAACCAC (5) 1.8 0.0018 E12.5 retina TGAGCCTGGT (3) 7.5 0.0075 E12.5 retina GGCCCCTTGG (3) 1.9 0.0019 E12.5 retina GTTTGTACAA (2) 1.9 0.0019 E14.5 retina TGAGCCTGGT (3) 14.6 0.0146 E14.5 retina GTTTGTACAA (2) 3.6 0.0036 E14.5 retina GGAAAACCAC (5) 1.8 0.0018 E16.5 retina TGAGCCTGGT (3) 27.2 0.0272 E16.5 retina GGAAAACCAC (5) 7.2 0.0072 E16.5 retina GTTTGTACAA (2) 3.6 0.0036 E16.5 retina GGCCCCTTGG (3) 1.8 0.0018 E18.5 retina TGAGCCTGGT (3) 16.4 0.0164 E18.5 retina AAGCTGGGAG (3) 1.8 0.0018 E18.5 retina GGAAAACCAC (5) 1.8 0.0018 E18.5 retina GTTTGTACAA (2) 1.8 0.0018 P0.5 retina TGAGCCTGGT (3) 11.8 0.0118 P0.5 retina GGCCCCTTGG (3) 3.9 0.0039 P0.5 retina GTTTGTACAA (2) 3.9 0.0039 P0.5 retina GGAAAACCAC (5) 2 0.002 P2.5 retina TGAGCCTGGT (3) 26.4 0.0264 P2.5 retina GTTTGTACAA (2) 7 0.007 P2.5 retina GGAAAACCAC (5) 1.8 0.0018 P4.5 retina TGAGCCTGGT (3) 11.9 0.0119 P4.5 retina GGCCCCTTGG (3) 4 0.004 P4.5 retina GTTTGTACAA (2) 4 0.004 P4.5 retina AAGCTGGGAG (3) 2 0.002 P4.5 retina GACCCAAGGA (8) 2 0.002 P4.5 retina GGAAAACCAC (5) 2 0.002 P6.5 retina TGAGCCTGGT (3) 15 0.015 P6.5 retina AAGCTGGGAG (3) 3.3 0.0033 P6.5 retina GGCCCCTTGG (3) 1.7 0.0017 P6.5 retina GTTTGTACAA (2) 1.7 0.0017 P10.5 crx- retina TGAGCCTGGT (3) 22.3 0.0223 P10.5 crx- retina GTTTGTACAA (2) 5.6 0.0056 P10.5 crx- retina GGAAAACCAC (5) 3.7 0.0037 P10.5 crx+ retina TGAGCCTGGT (3) 13.5 0.0135 P10.5 crx+ retina GTTTGTACAA (2) 7.7 0.0077 P10.5 crx+ retina GGAAAACCAC (5) 3.8 0.0038 P10.5 crx+ retina GGCCCCTTGG (3) 3.8 0.0038 P10.5 crx+ retina AAGCTGGGAG (3) 1.9 0.0019 Adult retinal TGAGCCTGGT (3) 14.8 0.0148 Adult retinal AAGCTGGGAG (3) 1.9 0.0019 Adult retinal GGCCCCTTGG (3) 1.9 0.0019 Adult retinal GTTTGTACAA (2) 1.9 0.0019