Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.182412
Cdc16
CDC16 cell division cycle 16 homolog (S. cerevisiae)
8
69957
Mm.182412
2700071J12Rik
RIKEN cDNA 2700071J12 gene
8
72610
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTATAAAAA (
7
)
27.7
0.0277
P8 Cb GC
TGCCAGAGTA
(
2
)
8.2
0.0082
P8 Cb GC
ATAATATATA
(
2
)
1.6
0.0016
Cb medulloblastoma
TGTATAAAAA (
7
)
50.9
0.0509
Cb medulloblastoma
ATGAAAAGAC (
4
)
4.6
0.0046
Cb medulloblastoma
ATAATATATA
(
2
)
2.3
0.0023
Cb medulloblastoma
TGCCAGAGTA
(
2
)
2.3
0.0023
P8 GC+1d culture
TGTATAAAAA (
7
)
45.7
0.0457
P8 GC+1d culture
TGCCAGAGTA
(
2
)
10.3
0.0103
P8 GC+SHH+1d culture
TGTATAAAAA (
7
)
72.6
0.0726
P8 GC+SHH+1d culture
TGCCAGAGTA
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
ATGAAAAGAC (
4
)
1.2
0.0012
3T3 fibroblasts
TGCCAGAGTA
(
2
)
17.5
0.0175
E15 cortex
TGTATAAAAA (
7
)
9.9
0.0099
E15 cortex
TGCCAGAGTA
(
2
)
4.9
0.0049
P1 cortex
TGTATAAAAA (
7
)
145.4
0.1454
P1 cortex
TGCCAGAGTA
(
2
)
18.2
0.0182
Hypothalamus
TGTATAAAAA (
7
)
77.9
0.0779
Hypothalamus
TGCCAGAGTA
(
2
)
3.6
0.0036
Hypothalamus
ATAATATATA
(
2
)
1.8
0.0018
Hypothalamus
ATGAAAAGAC (
4
)
1.8
0.0018
E12.5 retina
TGTATAAAAA (
7
)
26.3
0.0263
E12.5 retina
TGCCAGAGTA
(
2
)
15
0.015
E12.5 retina
ATGAAAAGAC (
4
)
1.9
0.0019
E14.5 retina
TGTATAAAAA (
7
)
51
0.051
E14.5 retina
TGCCAGAGTA
(
2
)
18.2
0.0182
E14.5 retina
ATGAAAAGAC (
4
)
1.8
0.0018
E16.5 retina
TGTATAAAAA (
7
)
56.1
0.0561
E16.5 retina
TGCCAGAGTA
(
2
)
7.2
0.0072
E18.5 retina
TGTATAAAAA (
7
)
111
0.111
E18.5 retina
TGCCAGAGTA
(
2
)
10.9
0.0109
E18.5 retina
ATGAAAAGAC (
4
)
5.5
0.0055
P0.5 retina
TGTATAAAAA (
7
)
25.5
0.0255
P0.5 retina
TGCCAGAGTA
(
2
)
3.9
0.0039
P2.5 retina
TGTATAAAAA (
7
)
42.2
0.0422
P2.5 retina
TGCCAGAGTA
(
2
)
1.8
0.0018
P4.5 retina
TGTATAAAAA (
7
)
69.3
0.0693
P4.5 retina
TGCCAGAGTA
(
2
)
5.9
0.0059
P4.5 retina
ATAATATATA
(
2
)
4
0.004
P4.5 retina
ATGAAAAGAC (
4
)
2
0.002
P6.5 retina
TGTATAAAAA (
7
)
76.7
0.0767
P6.5 retina
ATGAAAAGAC (
4
)
1.7
0.0017
P6.5 retina
TGCCAGAGTA
(
2
)
1.7
0.0017
P10.5 crx- retina
TGTATAAAAA (
7
)
31.6
0.0316
P10.5 crx- retina
TGCCAGAGTA
(
2
)
13
0.013
P10.5 crx+ retina
TGTATAAAAA (
7
)
53.8
0.0538
P10.5 crx+ retina
TGCCAGAGTA
(
2
)
1.9
0.0019
Adult retinal
TGTATAAAAA (
7
)
20.4
0.0204
Adult retinal
TGCCAGAGTA
(
2
)
5.6
0.0056
ONL
TGTATAAAAA (
7
)
26.8
0.0268
ONL
ATGAAAAGAC (
4
)
3.8
0.0038
ONL
TGCCAGAGTA
(
2
)
3.8
0.0038
