Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.182440	Apoc1	apolipoprotein C-I	7	7 4.0 cM	11812
Gene Ontology	extracellular | extracellular space | lipid transport | lipid transporter activity | lipoprotein metabolism | transport
Human Homolog	APOC1[apolipoprotein C-I]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTACAGTA (6) 1.6 0.0016 P8 Cb GC TCAGCTGTTC (3) 1.6 0.0016 Cb medulloblastoma ACCTTGGAAG (12) 2.3 0.0023 P8 GC+1d culture ACATTGGAGG (2) 2.3 0.0023 P8 GC+1d culture ACCTTGGAAG (12) 1.1 0.0011 P8 GC+1d culture GACTACAGTA (6) 1.1 0.0011 P8 GC+SHH+1d culture ACATTGGAGG (2) 2.3 0.0023 P8 GC+SHH+1d culture ACCTTGGAAG (12) 2.3 0.0023 P8 GC+SHH+1d culture GACTACAGTA (6) 2.3 0.0023 3T3 fibroblasts ACATTGGAGG (2) 3.5 0.0035 Hypothalamus TCAGCTGTTC (3) 1.8 0.0018 E12.5 retina GACTACAGTA (6) 1.9 0.0019 E14.5 retina GACTACAGTA (6) 3.6 0.0036 E16.5 retina ACATTGGAGG (2) 1.8 0.0018 E16.5 retina GACTACAGTA (6) 1.8 0.0018 E18.5 retina GACTACAGTA (6) 1.8 0.0018 P0.5 retina GACTACAGTA (6) 3.9 0.0039 P0.5 retina ACCTTGGAAG (12) 2 0.002 P0.5 retina TCAGCTGTTC (3) 2 0.002 P2.5 retina GACTACAGTA (6) 5.3 0.0053 P2.5 retina ACATTGGAGG (2) 1.8 0.0018 P6.5 retina ACCTTGGAAG (12) 3.3 0.0033 P6.5 retina GACTACAGTA (6) 1.7 0.0017 P10.5 crx- retina ACCTTGGAAG (12) 5.6 0.0056 P10.5 crx- retina ACATTGGAGG (2) 1.9 0.0019 P10.5 crx+ retina ACCTTGGAAG (12) 5.8 0.0058 P10.5 crx+ retina GACTACAGTA (6) 1.9 0.0019 Adult retinal ACCTTGGAAG (12) 3.7 0.0037 ONL GACTACAGTA (6) 1.9 0.0019