Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.182445	Cog1	component of oligomeric golgi complex 1	11		16834
Gene Ontology	Golgi apparatus | membrane | protein transport | transport
Human Homolog	COG1[component of oligomeric golgi complex 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 145 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATTAATAAA (8) 6.5 0.0065 P8 Cb GC ACAAGCACGA 4.9 0.0049 P8 Cb GC GAAGGGCCAG (10) 3.3 0.0033 P8 Cb GC CCCAGGCTCT (10) 1.6 0.0016 P8 Cb GC GTTTTTGTTT (9) 1.6 0.0016 Cb medulloblastoma TATTAATAAA (8) 32.4 0.0324 Cb medulloblastoma GCGGCGCAGC (9) 4.6 0.0046 Cb medulloblastoma TTATGTTCAG (5) 4.6 0.0046 Cb medulloblastoma CCCAGGCTCT (10) 2.3 0.0023 Cb medulloblastoma CCGTAAAAAA (3) 2.3 0.0023 Cb medulloblastoma CTCTGACCAG (4) 2.3 0.0023 P8 GC+1d culture CCCAGGCTCT (10) 5.7 0.0057 P8 GC+1d culture ACAAGCACAA (7) 4.6 0.0046 P8 GC+1d culture ACAAGCACGA 3.4 0.0034 P8 GC+1d culture CCGTAAAAAA (3) 3.4 0.0034 P8 GC+1d culture GCGGCGCAGC (9) 3.4 0.0034 P8 GC+1d culture GTTTTTGTTT (9) 2.3 0.0023 P8 GC+1d culture CTCTGACCAG (4) 1.1 0.0011 P8 GC+1d culture GAAGGGCCAG (10) 1.1 0.0011 P8 GC+1d culture TATTAATAAA (8) 1.1 0.0011 P8 GC+SHH+1d culture ACAAGCACAA (7) 3.5 0.0035 P8 GC+SHH+1d culture CCCAGGCTCT (10) 3.5 0.0035 P8 GC+SHH+1d culture ACAAGCACGA 2.3 0.0023 P8 GC+SHH+1d culture CCGTAAAAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture GAAGGGCCAG (10) 2.3 0.0023 P8 GC+SHH+1d culture GCGGCGCAGC (9) 2.3 0.0023 P8 GC+SHH+1d culture GTTTTTGTTT (9) 2.3 0.0023 P8 GC+SHH+1d culture TATTAATAAA (8) 2.3 0.0023 P8 GC+SHH+1d culture TTATGTTCAG (5) 2.3 0.0023 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CCCAGGCTCT (10) 7 0.007 3T3 fibroblasts GAAGGGCCAG (10) 3.5 0.0035 3T3 fibroblasts GCGGCGCAGC (9) 3.5 0.0035 E15 cortex GAAGGGCCAG (10) 14.8 0.0148 E15 cortex CCCAGGCTCT (10) 4.9 0.0049 E15 cortex CTCTGACCAG (4) 4.9 0.0049 E15 cortex GAAATGGAAA (8) 4.9 0.0049 E15 cortex GCAGCCCAGA (5) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex TATTAATAAA (8) 13.6 0.0136 Hypothalamus TATTAATAAA (8) 45.3 0.0453 Hypothalamus GGGAGGGGAG (4) 3.6 0.0036 Hypothalamus TTATGTTCAG (5) 3.6 0.0036 Hypothalamus ACAAGCACAA (7) 1.8 0.0018 Hypothalamus CCCAGGCTCT (10) 1.8 0.0018 Hypothalamus CCGTAAAAAA (3) 1.8 0.0018 Hypothalamus GTTTTTGTTT (9) 1.8 0.0018 E12.5 retina CCGTAAAAAA (3) 3.8 0.0038 E12.5 retina CTCTGACCAG (4) 3.8 0.0038 E12.5 retina GAAGGGCCAG (10) 3.8 0.0038 E12.5 retina TTATGTTCAG (5) 3.8 0.0038 E12.5 retina CCCAGGCTCT (10) 1.9 0.0019 E12.5 retina GCAGCCCAGA (5) 1.9 0.0019 E12.5 retina GGGAGGGGAG (4) 1.9 0.0019 E12.5 retina TATTAATAAA (8) 1.9 0.0019 E14.5 retina GGGAGGGGAG (4) 9.1 0.0091 E14.5 retina ACAAGCACAA (7) 5.5 0.0055 E14.5 retina GAAGGGCCAG (10) 5.5 0.0055 E14.5 retina CCCAGGCTCT (10) 1.8 0.0018 E14.5 retina CCGTAAAAAA (3) 1.8 0.0018 E14.5 retina GCCTTTTTAC (3) 1.8 0.0018 E14.5 retina GCGGCGCAGC (9) 1.8 0.0018 E14.5 retina TATTAATAAA (8) 1.8 0.0018 E14.5 retina TTATGTTCAG (5) 1.8 0.0018 E16.5 retina TATTAATAAA (8) 16.3 0.0163 E16.5 retina CCCAGGCTCT (10) 5.4 0.0054 E16.5 retina CTCAGGGAAG (5) 3.6 0.0036 E16.5 retina TTATGTTCAG (5) 3.6 0.0036 E16.5 retina ACAAGCACAA (7) 1.8 0.0018 E16.5 retina CCGTAAAAAA (3) 1.8 0.0018 E16.5 retina CTCTGACCAG (4) 1.8 0.0018 E16.5 retina GTTTTTGTTT (9) 1.8 0.0018 E18.5 retina CCGTAAAAAA (3) 14.6 0.0146 E18.5 retina TATTAATAAA (8) 7.3 0.0073 E18.5 retina GGGAGGGGAG (4) 3.6 0.0036 E18.5 retina GAAGGGCCAG (10) 1.8 0.0018 E18.5 retina GTTTTTGTTT (9) 1.8 0.0018 P0.5 retina TTATGTTCAG (5) 7.9 0.0079 P0.5 retina CTCTGACCAG (4) 3.9 0.0039 P0.5 retina GAAGGGCCAG (10) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina ACAAGCACAA (7) 2 0.002 P0.5 retina CCCAGGCTCT (10) 2 0.002 P0.5 retina CCGTAAAAAA (3) 2 0.002 P0.5 retina TATTAATAAA (8) 2 0.002 P2.5 retina TTATGTTCAG (5) 12.3 0.0123 P2.5 retina GAAGGGCCAG (10) 5.3 0.0053 P2.5 retina TATTAATAAA (8) 5.3 0.0053 P2.5 retina ACAAGCACAA (7) 3.5 0.0035 P2.5 retina CCCAGGCTCT (10) 3.5 0.0035 P2.5 retina CCGTAAAAAA (3) 3.5 0.0035 P2.5 retina CTCTGACCAG (4) 3.5 0.0035 P2.5 retina GCCTTTTTAC (3) 1.8 0.0018 P2.5 retina GCGGCGCAGC (9) 1.8 0.0018 P2.5 retina GGGAGGGGAG (4) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TATTAATAAA (8) 15.9 0.0159 P4.5 retina CCGTAAAAAA (3) 4 0.004 P4.5 retina CTCTGACCAG (4) 4 0.004 P4.5 retina GAAGGGCCAG (10) 4 0.004 P4.5 retina GGGAGGGGAG (4) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTTTTTGTTT (9) 2 0.002 P4.5 retina TTATGTTCAG (5) 2 0.002 P6.5 retina TATTAATAAA (8) 16.7 0.0167 P6.5 retina TTATGTTCAG (5) 5 0.005 P6.5 retina CCCAGGCTCT (10) 3.3 0.0033 P6.5 retina GGGAGGGGAG (4) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CTCAGGGAAG (5) 1.7 0.0017 P6.5 retina CTCTGACCAG (4) 1.7 0.0017 P6.5 retina GAAATGGAAA (8) 1.7 0.0017 P6.5 retina GAAGGGCCAG (10) 1.7 0.0017 P6.5 retina GCGGCGCAGC (9) 1.7 0.0017 P6.5 retina GTTTTTGTTT (9) 1.7 0.0017 P10.5 crx- retina CCCAGGCTCT (10) 9.3 0.0093 P10.5 crx- retina TATTAATAAA (8) 9.3 0.0093 P10.5 crx- retina TTATGTTCAG (5) 9.3 0.0093 P10.5 crx- retina GCGGCGCAGC (9) 3.7 0.0037 P10.5 crx- retina CCGTAAAAAA (3) 1.9 0.0019 P10.5 crx- retina CTCAGGGAAG (5) 1.9 0.0019 P10.5 crx- retina GAAATGGAAA (8) 1.9 0.0019 P10.5 crx- retina GTTTTTGTTT (9) 1.9 0.0019 P10.5 crx+ retina CCCAGGCTCT (10) 9.6 0.0096 P10.5 crx+ retina TATTAATAAA (8) 9.6 0.0096 P10.5 crx+ retina TTATGTTCAG (5) 5.8 0.0058 P10.5 crx+ retina CCGTAAAAAA (3) 3.8 0.0038 P10.5 crx+ retina CTCTGACCAG (4) 3.8 0.0038 P10.5 crx+ retina GCAGCCCAGA (5) 1.9 0.0019 Adult retinal CCCAGGCTCT (10) 13 0.013 Adult retinal CCGTAAAAAA (3) 3.7 0.0037 Adult retinal TATTAATAAA (8) 3.7 0.0037 Adult retinal ACAAGCACAA (7) 1.9 0.0019 Adult retinal CTCAGGGAAG (5) 1.9 0.0019 Adult retinal CTCTGACCAG (4) 1.9 0.0019 Adult retinal GGGAGGGGAG (4) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTTTTTGTTT (9) 1.9 0.0019 Adult retinal TTATGTTCAG (5) 1.9 0.0019 ONL TATTAATAAA (8) 15.3 0.0153 ONL TTATGTTCAG (5) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL ACAAGCACAA (7) 1.9 0.0019 ONL GCCTTTTTAC (3) 1.9 0.0019 ONL GGGAGGGGAG (4) 1.9 0.0019