Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.182563	Rab1b	RAB1B, member RAS oncogene family	19		76308
Gene Ontology	DNA binding | GTP binding | GTPase activity | intracellular protein transport | protein transport | protein transporter activity | regulation of transcription, DNA-dependent | small GTPase mediated signal transduction | two-component signal transduction system (phosphorelay)
Human Homolog	RAB1B[RAB1B, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGTGACTG (2) 66.9 0.0669 P8 Cb GC GGGGAAGGGC (16) 4.9 0.0049 P8 Cb GC TCCTTTGTGC (3) 1.6 0.0016 P8 Cb GC TGCTGCCTGC (2) 1.6 0.0016 Cb medulloblastoma TTTGTGACTG (2) 23.1 0.0231 Cb medulloblastoma TCCTTTGTGC (3) 4.6 0.0046 Cb medulloblastoma CAGAGCCTGT (2) 2.3 0.0023 Cb medulloblastoma TGCTGCCTGC (2) 2.3 0.0023 P8 GC+1d culture TTTGTGACTG (2) 52.5 0.0525 P8 GC+1d culture TCCTTTGTGC (3) 10.3 0.0103 P8 GC+1d culture GGGGAAGGGC (16) 2.3 0.0023 P8 GC+1d culture TCCTTGGCAG (6) 2.3 0.0023 P8 GC+1d culture GTGGTGTATG (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTGTGACTG (2) 53.9 0.0539 P8 GC+SHH+1d culture TCCTTTGTGC (3) 8.2 0.0082 P8 GC+SHH+1d culture CAGAGCCTGT (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGGAAGGGC (16) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGCAGGC (3) 1.2 0.0012 P8 GC+SHH+1d culture TCCTTGGCAG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGCTGCCTGC (2) 1.2 0.0012 3T3 fibroblasts TCCTTTGTGC (3) 14 0.014 3T3 fibroblasts TTTGTGACTG (2) 10.5 0.0105 3T3 fibroblasts GGGGAAGGGC (16) 3.5 0.0035 3T3 fibroblasts GGGGGCAGGC (3) 3.5 0.0035 E15 cortex TTTGTGACTG (2) 29.7 0.0297 E15 cortex TCCTTTGTGC (3) 4.9 0.0049 P1 cortex TCCTTTGTGC (3) 9.1 0.0091 P1 cortex TTTGTGACTG (2) 9.1 0.0091 Hypothalamus TTTGTGACTG (2) 30.8 0.0308 Hypothalamus GTGGTGTATG (3) 1.8 0.0018 Hypothalamus TGCTGCCTGC (2) 1.8 0.0018 E12.5 retina TTTGTGACTG (2) 46.9 0.0469 E12.5 retina TCCTTTGTGC (3) 7.5 0.0075 E12.5 retina GGGGAAGGGC (16) 5.6 0.0056 E14.5 retina TTTGTGACTG (2) 72.9 0.0729 E14.5 retina GGGGAAGGGC (16) 5.5 0.0055 E14.5 retina TCCTTTGTGC (3) 1.8 0.0018 E16.5 retina TTTGTGACTG (2) 76.1 0.0761 E16.5 retina GGGGAAGGGC (16) 5.4 0.0054 E16.5 retina TCCTTGGCAG (6) 3.6 0.0036 E16.5 retina GTGGTGTATG (3) 1.8 0.0018 E16.5 retina TCCTTTGTGC (3) 1.8 0.0018 E16.5 retina TGCTGCCTGC (2) 1.8 0.0018 E18.5 retina TTTGTGACTG (2) 43.7 0.0437 E18.5 retina GGGGAAGGGC (16) 5.5 0.0055 P0.5 retina TTTGTGACTG (2) 41.2 0.0412 P0.5 retina GGGGAAGGGC (16) 7.9 0.0079 P0.5 retina TCCTTTGTGC (3) 7.9 0.0079 P2.5 retina TTTGTGACTG (2) 56.3 0.0563 P2.5 retina GGGGAAGGGC (16) 10.6 0.0106 P2.5 retina TCCTTTGTGC (3) 5.3 0.0053 P4.5 retina TTTGTGACTG (2) 27.7 0.0277 P4.5 retina TCCTTTGTGC (3) 7.9 0.0079 P4.5 retina GGGGAAGGGC (16) 4 0.004 P6.5 retina TTTGTGACTG (2) 40 0.04 P6.5 retina GGGGAAGGGC (16) 8.3 0.0083 P6.5 retina TCCTTTGTGC (3) 5 0.005 P6.5 retina GTGGTGTATG (3) 3.3 0.0033 P10.5 crx- retina TTTGTGACTG (2) 59.4 0.0594 P10.5 crx- retina GGGGAAGGGC (16) 13 0.013 P10.5 crx- retina TCCTTTGTGC (3) 5.6 0.0056 P10.5 crx+ retina TTTGTGACTG (2) 32.7 0.0327 P10.5 crx+ retina GGGGAAGGGC (16) 13.5 0.0135 P10.5 crx+ retina TCCTTTGTGC (3) 7.7 0.0077 P10.5 crx+ retina GTGGTGTATG (3) 1.9 0.0019 P10.5 crx+ retina TGCTGCCTGC (2) 1.9 0.0019 Adult retinal TTTGTGACTG (2) 16.7 0.0167 Adult retinal GGGGAAGGGC (16) 5.6 0.0056 Adult retinal TCCTTTGTGC (3) 5.6 0.0056 Adult retinal CAGAGCCTGT (2) 1.9 0.0019 Adult retinal GGGGGCAGGC (3) 1.9 0.0019 Adult retinal TCCTTGGCAG (6) 1.9 0.0019 Adult retinal TGCTGCCTGC (2) 1.9 0.0019 ONL TTTGTGACTG (2) 21.1 0.0211 ONL GTGGTGTATG (3) 3.8 0.0038 ONL TCCTTTGTGC (3) 3.8 0.0038 ONL GGGGAAGGGC (16) 1.9 0.0019 ONL GGGGGCAGGC (3) 1.9 0.0019