Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.182628	Rad21	RAD21 homolog (S. pombe)	15		19357
Gene Ontology	apoptosis | calcium ion binding | cell cycle | chromosome organization and biogenesis (sensu Eukarya) | chromosome segregation | DNA repair | intracellular | mitosis | nuclear chromosome | nucleus | protein biosynthesis | ribosome | RNA binding | rRNA binding | structural constituent of ribosome
Human Homolog	RAD21[RAD21 homolog (S. pombe)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATGTCCCCT 14.7 0.0147 P8 Cb GC GATGAAGATG (5) 1.6 0.0016 P8 Cb GC GTTACAGGCA (2) 1.6 0.0016 P8 Cb GC TCTTCCCATA (4) 1.6 0.0016 Cb medulloblastoma GATGTCCCCT 2.3 0.0023 Cb medulloblastoma GCTGGAAAAA (11) 2.3 0.0023 Cb medulloblastoma GTTACAGGCA (2) 2.3 0.0023 Cb medulloblastoma TCTTCCCATA (4) 2.3 0.0023 P8 GC+1d culture GATGTCCCCT 6.8 0.0068 P8 GC+1d culture TCTTCCCATA (4) 3.4 0.0034 P8 GC+1d culture TTAAAGTAAA (3) 3.4 0.0034 P8 GC+1d culture GAAGTCTTAG 1.1 0.0011 P8 GC+1d culture GATGAAGATG (5) 1.1 0.0011 P8 GC+1d culture GCTGGAAAAA (11) 1.1 0.0011 P8 GC+SHH+1d culture GATGTCCCCT 7 0.007 P8 GC+SHH+1d culture CTGCTGTGTG (3) 1.2 0.0012 P8 GC+SHH+1d culture GATGAAGATG (5) 1.2 0.0012 P8 GC+SHH+1d culture GTTACAGGCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTTTCAGGCA (2) 1.2 0.0012 P8 GC+SHH+1d culture TTAAAGTAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTAAAGTAA 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CCCCCACCAC (4) 7 0.007 3T3 fibroblasts CTGCTGTGTG (3) 3.5 0.0035 3T3 fibroblasts GATGTCCCCT 3.5 0.0035 3T3 fibroblasts GTTACAGGCA (2) 3.5 0.0035 E15 cortex GATGTCCCCT 9.9 0.0099 E15 cortex CCCCCACACA (2) 4.9 0.0049 E15 cortex CCCCCACCAC (4) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex GTTACAGGGA (7) 4.9 0.0049 P1 cortex GATGTCCCCT 9.1 0.0091 Hypothalamus CCCCCACACA (2) 1.8 0.0018 Hypothalamus GATGAAGATG (5) 1.8 0.0018 Hypothalamus GCTGGAAAAA (11) 1.8 0.0018 E12.5 retina TCTTCCCATA (4) 5.6 0.0056 E12.5 retina GATGTCCCCT 3.8 0.0038 E12.5 retina GATGAAGATG (5) 1.9 0.0019 E14.5 retina GATGTCCCCT 5.5 0.0055 E14.5 retina CTCCACCACC (3) 1.8 0.0018 E14.5 retina GAAGTCTTAG 1.8 0.0018 E14.5 retina TCTTCCCATA (4) 1.8 0.0018 E14.5 retina TTCTGAAATC (3) 1.8 0.0018 E14.5 retina TTTAAAGTAA 1.8 0.0018 E16.5 retina GATGTCCCCT 10.9 0.0109 E16.5 retina TCTTCCCATA (4) 5.4 0.0054 E16.5 retina GTTTCAGGCA (2) 3.6 0.0036 E16.5 retina ATCTCATTAT 1.8 0.0018 E18.5 retina GATGTCCCCT 5.5 0.0055 E18.5 retina GAAGTCTTAG 1.8 0.0018 E18.5 retina TTCTGAAATC (3) 1.8 0.0018 P0.5 retina GATGTCCCCT 15.7 0.0157 P0.5 retina TCTTCCCATA (4) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CCCCCACACA (2) 2 0.002 P0.5 retina CTGCTGTGTG (3) 2 0.002 P0.5 retina GCTGGAAAAA (11) 2 0.002 P2.5 retina GATGTCCCCT 5.3 0.0053 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TCTTCCCATA (4) 1.8 0.0018 P2.5 retina TTAAAGTAAA (3) 1.8 0.0018 P2.5 retina TTCTGAAATC (3) 1.8 0.0018 P2.5 retina TTTAAAGTAA 1.8 0.0018 P4.5 retina TCTTCCCATA (4) 4 0.004 P4.5 retina GATGTCCCCT 2 0.002 P4.5 retina GCTGGAAAAA (11) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TTAAAGTAAA (3) 2 0.002 P6.5 retina ATCTCATTAT 3.3 0.0033 P6.5 retina CTCCACCACC (3) 3.3 0.0033 P6.5 retina GCTGGAAAAA (11) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GATGTCCCCT 1.7 0.0017 P6.5 retina GTTACAGGGA (7) 1.7 0.0017 P6.5 retina TCTTCCCATA (4) 1.7 0.0017 P10.5 crx- retina GATGTCCCCT 9.3 0.0093 P10.5 crx- retina GATGAAGATG (5) 1.9 0.0019 P10.5 crx- retina GCTGGAAAAA (11) 1.9 0.0019 P10.5 crx- retina GTTACAGGCA (2) 1.9 0.0019 P10.5 crx- retina TCTTCCCATA (4) 1.9 0.0019 P10.5 crx- retina TTCTGAAATC (3) 1.9 0.0019 P10.5 crx+ retina GCTGGAAAAA (11) 9.6 0.0096 P10.5 crx+ retina GATGTCCCCT 3.8 0.0038 P10.5 crx+ retina CTGCTGTGTG (3) 1.9 0.0019 Adult retinal GATGTCCCCT 7.4 0.0074 Adult retinal GATGAAGATG (5) 3.7 0.0037 Adult retinal GTTTCAGGCA (2) 3.7 0.0037 Adult retinal GCTGGAAAAA (11) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTTACAGGGA (7) 1.9 0.0019 Adult retinal TCTTCCCATA (4) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GTTACAGGGA (7) 5.7 0.0057 ONL CCCCCACACA (2) 1.9 0.0019 ONL CTGCTGTGTG (3) 1.9 0.0019 ONL GATGTCCCCT 1.9 0.0019