Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.185467	Gtf2h3	general transcription factor IIH, polypeptide 3, 34kDa	5	5 68.0 cM	209357
Gene Ontology	DNA repair | nucleotide-excision repair | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor TFIIH complex | translation factor activity, nucleic acid binding
Human Homolog	GTF2H3[general transcription factor IIH, polypeptide 3, 34kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAATGAGAA (2) 9.8 0.0098 Cb medulloblastoma GCGGCGCCGC (4) 4.6 0.0046 Cb medulloblastoma CACAAAGCTG 2.3 0.0023 Cb medulloblastoma TAAATGAGAA (2) 2.3 0.0023 P8 GC+1d culture GCGGCGCCGC (4) 5.7 0.0057 P8 GC+1d culture TAAATGAGAA (2) 3.4 0.0034 P8 GC+SHH+1d culture GCGGCGCCGC (4) 8.2 0.0082 P8 GC+SHH+1d culture TAAATGAGAA (2) 3.5 0.0035 P8 GC+SHH+1d culture CACAAAGCTG 1.2 0.0012 P8 GC+SHH+1d culture GTACACTGCT 1.2 0.0012 3T3 fibroblasts GCGGCGCCGC (4) 24.5 0.0245 E15 cortex GCGGCGCCGC (4) 9.9 0.0099 E15 cortex TAAATGAGAA (2) 4.9 0.0049 P1 cortex CACAAAGCTG 4.5 0.0045 P1 cortex GCGGCGCCGC (4) 4.5 0.0045 P1 cortex GTACACTGCT 4.5 0.0045 Hypothalamus TAAATGAGAA (2) 5.4 0.0054 E12.5 retina TAAATGAGAA (2) 9.4 0.0094 E12.5 retina GCGGCGCCGC (4) 1.9 0.0019 E14.5 retina TAAATGAGAA (2) 7.3 0.0073 E16.5 retina TAAATGAGAA (2) 3.6 0.0036 E16.5 retina GCGGCGCCGC (4) 1.8 0.0018 E18.5 retina TAAATGAGAA (2) 12.7 0.0127 P0.5 retina TAAATGAGAA (2) 5.9 0.0059 P0.5 retina GCGGCGCCGC (4) 3.9 0.0039 P2.5 retina TAAATGAGAA (2) 1.8 0.0018 P4.5 retina TAAATGAGAA (2) 9.9 0.0099 P4.5 retina GCGGCGCCGC (4) 7.9 0.0079 P4.5 retina CACAAAGCTG 2 0.002 P6.5 retina GCGGCGCCGC (4) 6.7 0.0067 P6.5 retina TAAATGAGAA (2) 3.3 0.0033 P10.5 crx- retina GCGGCGCCGC (4) 16.7 0.0167 P10.5 crx- retina TAAATGAGAA (2) 3.7 0.0037 P10.5 crx+ retina GCGGCGCCGC (4) 13.5 0.0135 P10.5 crx+ retina TAAATGAGAA (2) 3.8 0.0038 P10.5 crx+ retina GTACACTGCT 1.9 0.0019 Adult retinal GCGGCGCCGC (4) 13 0.013 ONL GCGGCGCCGC (4) 13.4 0.0134