Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.185636	A430091O22Rik	RIKEN cDNA A430091O22 gene	4		242570
Gene Ontology	nucleic acid binding
Human Homolog	KIAA1579[hypothetical protein FLJ10770]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC CAGAAAAAAA (10) 8.2 0.0082 P8 Cb GC ACCAAGAGTC (2) 1.6 0.0016 P8 Cb GC CGCAGATTAT (8) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma CAGAAAAAAA (10) 9.2 0.0092 Cb medulloblastoma ACCAAAAGTC (3) 4.6 0.0046 Cb medulloblastoma ACCAAGAGTC (2) 4.6 0.0046 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture CGCAGATTAT (8) 5.7 0.0057 P8 GC+1d culture ACCAAGAGTC (2) 4.6 0.0046 P8 GC+1d culture ACCAAAAGTC (3) 1.1 0.0011 P8 GC+1d culture CAGAAAAAAA (10) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture ACCAAAAGTC (3) 3.5 0.0035 P8 GC+SHH+1d culture AACAACATTT (3) 1.2 0.0012 P8 GC+SHH+1d culture ACCAAGAGTC (2) 1.2 0.0012 P8 GC+SHH+1d culture CGCAGATTAT (8) 1.2 0.0012 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex AACAACATTT (3) 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus ACCAAAAGTC (3) 1.8 0.0018 Hypothalamus CGCAGATTAT (8) 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina ACCAAAAGTC (3) 5.6 0.0056 E12.5 retina AAGCCAGCTG (5) 1.9 0.0019 E12.5 retina ACCAAGAGTC (2) 1.9 0.0019 E12.5 retina CAGAAAAAAA (10) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina CGCAGATTAT (8) 9.1 0.0091 E14.5 retina ACCAAGAGTT 5.5 0.0055 E14.5 retina ACCAAAAGTC (3) 3.6 0.0036 E14.5 retina ACCAAGAGTC (2) 1.8 0.0018 E14.5 retina CAGAAAAAAA (10) 1.8 0.0018 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina ACCAAGAGTT 7.2 0.0072 E16.5 retina ACCAAAAGTC (3) 5.4 0.0054 E16.5 retina AAGCCAGCTG (5) 1.8 0.0018 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina ACCAAAAGTC (3) 3.6 0.0036 E18.5 retina ACCAAGAGTT 3.6 0.0036 E18.5 retina CAGAAAAAAA (10) 1.8 0.0018 E18.5 retina CGCAGATTAT (8) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina ACCAAAAGTC (3) 5.9 0.0059 P0.5 retina CAGAAAAAAA (10) 5.9 0.0059 P0.5 retina AAGCCAGCTG (5) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina ACCAAAAGTC (3) 3.5 0.0035 P2.5 retina ACCAAGAGTC (2) 3.5 0.0035 P2.5 retina CAGAAAAAAA (10) 3.5 0.0035 P2.5 retina CGCAGATTAT (8) 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina CAGAAAAAAA (10) 5.9 0.0059 P4.5 retina CGCAGATTAT (8) 2 0.002 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina CAGAAAAAAA (10) 1.7 0.0017 P6.5 retina CGCAGATTAT (8) 1.7 0.0017 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina ACCAAGAGTC (2) 7.4 0.0074 P10.5 crx- retina ACCAAAAGTC (3) 1.9 0.0019 P10.5 crx- retina ACCAAGAGTT 1.9 0.0019 P10.5 crx- retina CAGAAAAAAA (10) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina CAGAAAAAAA (10) 5.8 0.0058 P10.5 crx+ retina ACCAAAAGTC (3) 3.8 0.0038 P10.5 crx+ retina ACCAAGAGTC (2) 3.8 0.0038 P10.5 crx+ retina CGCAGATTAT (8) 3.8 0.0038 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal ACCAAAAGTC (3) 1.9 0.0019 Adult retinal ACCAAGAGTC (2) 1.9 0.0019 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL CAAAAAAAAA (157) 17.2 0.0172