Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.185735	Rfxap	regulatory factor X-associated protein	3		170767
Gene Ontology	DNA binding | nucleus | transcriptional activator activity
Human Homolog	RFXAP[regulatory factor X-associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCAAGGCCC (5) 4.9 0.0049 Cb medulloblastoma TGCAAGGCCC (5) 11.6 0.0116 P8 GC+1d culture TGCAAGGCCC (5) 8 0.008 P8 GC+SHH+1d culture GGTGCTTTCA (5) 4.7 0.0047 P8 GC+SHH+1d culture TGCAAGGCCC (5) 4.7 0.0047 3T3 fibroblasts TGCAAGGCCC (5) 7 0.007 3T3 fibroblasts GGTGCTTTCA (5) 3.5 0.0035 E15 cortex TGCAAGGCCC (5) 9.9 0.0099 E15 cortex CTAGGCAGGT (5) 4.9 0.0049 P1 cortex TGCAAGGCCC (5) 13.6 0.0136 Hypothalamus TGCAAGGCCC (5) 9.1 0.0091 Hypothalamus GGTGCTTTCA (5) 1.8 0.0018 E12.5 retina GGTGCTTTCA (5) 1.9 0.0019 E12.5 retina TGCAAGGCCC (5) 1.9 0.0019 E14.5 retina TGCAAGGCCC (5) 9.1 0.0091 E16.5 retina TGCAAGGCCC (5) 5.4 0.0054 E16.5 retina GGTGCTTTCA (5) 3.6 0.0036 E18.5 retina TGCAAGGCCC (5) 7.3 0.0073 P0.5 retina TGCAAGGCCC (5) 5.9 0.0059 P0.5 retina CTAGGCAGGT (5) 2 0.002 P0.5 retina GGTGCTTTCA (5) 2 0.002 P2.5 retina TGCAAGGCCC (5) 7 0.007 P2.5 retina GGTGCTTTCA (5) 3.5 0.0035 P4.5 retina TGCAAGGCCC (5) 7.9 0.0079 P4.5 retina CTAGGCAGGT (5) 2 0.002 P6.5 retina TGCAAGGCCC (5) 10 0.01 P6.5 retina GGTGCTTTCA (5) 1.7 0.0017 P10.5 crx- retina TGCAAGGCCC (5) 7.4 0.0074 P10.5 crx- retina GGTGCTTTCA (5) 3.7 0.0037 P10.5 crx+ retina TGCAAGGCCC (5) 5.8 0.0058 Adult retinal TGCAAGGCCC (5) 11.1 0.0111 Adult retinal CTAGGCAGGT (5) 1.9 0.0019 ONL TGCAAGGCCC (5) 3.8 0.0038 ONL GGTGCTTTCA (5) 1.9 0.0019