Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18652	Sms	spermine synthase	X	X 65.45 cM	20603
Gene Ontology	catalytic activity | cellular_component unknown | spermine metabolism | spermine synthase activity | transferase activity
Human Homolog	SMS[spermine synthase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCTTGCTTT 4.9 0.0049 P8 Cb GC TCCAAATTAA 3.3 0.0033 P8 Cb GC GATTGGTGTT (3) 1.6 0.0016 P8 Cb GC TCCATATTAA 1.6 0.0016 P8 Cb GC TCTTAAAAAA (9) 1.6 0.0016 Cb medulloblastoma TCCTTGCTTT 9.2 0.0092 Cb medulloblastoma GGGGAAAAAA (28) 4.6 0.0046 Cb medulloblastoma AAATGCTGCT (5) 2.3 0.0023 Cb medulloblastoma GATTGGTGTT (3) 2.3 0.0023 Cb medulloblastoma TCCAAATTAA 2.3 0.0023 Cb medulloblastoma TCCATATTAA 2.3 0.0023 Cb medulloblastoma TCTTAATAAA (3) 2.3 0.0023 P8 GC+1d culture TGGAGGAATG 5.7 0.0057 P8 GC+1d culture TCCAAATTAA 2.3 0.0023 P8 GC+1d culture TCTTAATAAA (3) 2.3 0.0023 P8 GC+1d culture AGGTGGGGTG (3) 1.1 0.0011 P8 GC+1d culture GGGGAAAAAA (28) 1.1 0.0011 P8 GC+1d culture TCCTTGCTTT 1.1 0.0011 P8 GC+SHH+1d culture TGGAGGAATG 10.5 0.0105 P8 GC+SHH+1d culture TCCTTGCTTT 3.5 0.0035 P8 GC+SHH+1d culture TCTTAATAAA (3) 3.5 0.0035 P8 GC+SHH+1d culture TCCAAATTAA 1.2 0.0012 P8 GC+SHH+1d culture TGAATAGCAA (8) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AAATGCTGCT (5) 3.5 0.0035 3T3 fibroblasts GATTGGTGTT (3) 3.5 0.0035 3T3 fibroblasts TGGAGGAATG 3.5 0.0035 E15 cortex GGGGAAAAAA (28) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex TCCATATTAA 13.6 0.0136 P1 cortex TGGAGGAATG 13.6 0.0136 P1 cortex TCCTTGCTTT 4.5 0.0045 Hypothalamus TCCTTGCTTT 7.2 0.0072 Hypothalamus TCTTAATAAA (3) 7.2 0.0072 Hypothalamus AAATGCTGCT (5) 1.8 0.0018 Hypothalamus AATTCCTTCT (4) 1.8 0.0018 E12.5 retina TGGAGGAATG 9.4 0.0094 E12.5 retina AATTCCTTCT (4) 1.9 0.0019 E12.5 retina GATTGGTGTT (3) 1.9 0.0019 E12.5 retina GGGGAAAAAA (28) 1.9 0.0019 E12.5 retina TCCAAATTAA 1.9 0.0019 E12.5 retina TGAATAGCAA (8) 1.9 0.0019 E14.5 retina TCCAAATTAA 5.5 0.0055 E14.5 retina TGGAGGAATG 3.6 0.0036 E14.5 retina TCCTTGCTTT 1.8 0.0018 E14.5 retina TGAATAGCAA (8) 1.8 0.0018 E16.5 retina TCCTTGCTTT 3.6 0.0036 E16.5 retina AAATGCTGCT (5) 1.8 0.0018 E16.5 retina AGGTGGGGTG (3) 1.8 0.0018 E16.5 retina GGGGAAAAAA (28) 1.8 0.0018 E16.5 retina TCCAAATTAA 1.8 0.0018 E16.5 retina TCTTAATAAA (3) 1.8 0.0018 E16.5 retina TGGAGGAATG 1.8 0.0018 E18.5 retina TCCTTGCTTT 5.5 0.0055 E18.5 retina TGGAGGAATG 5.5 0.0055 E18.5 retina GGGGAAAAAA (28) 3.6 0.0036 E18.5 retina TCCAAATTAA 3.6 0.0036 E18.5 retina TCTTAAAAAA (9) 1.8 0.0018 E18.5 retina TCTTAATAAA (3) 1.8 0.0018 E18.5 retina TGAATAGCAA (8) 1.8 0.0018 P0.5 retina TGGAGGAATG 7.9 0.0079 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GATTGGTGTT (3) 2 0.002 P0.5 retina TCCTTGCTTT 2 0.002 P0.5 retina TCTTAATAAA (3) 2 0.002 P2.5 retina GATTGGTGTT (3) 3.5 0.0035 P2.5 retina TCTTAAAAAA (9) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TCCAAATTAA 1.8 0.0018 P2.5 retina TCCTTGCTTT 1.8 0.0018 P2.5 retina TGGAGGAATG 1.8 0.0018 P4.5 retina GATTGGTGTT (3) 4 0.004 P4.5 retina TCCTTGCTTT 4 0.004 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TCCAAATTAA 2 0.002 P4.5 retina TCTTAAAAAA (9) 2 0.002 P4.5 retina TGGAGGAATG 2 0.002 P6.5 retina TCCTTGCTTT 16.7 0.0167 P6.5 retina TGGAGGAATG 8.3 0.0083 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AATTCCTTCT (4) 1.7 0.0017 P6.5 retina GGGGAAAAAA (28) 1.7 0.0017 P6.5 retina TCTTAAAAAA (9) 1.7 0.0017 P10.5 crx- retina TCCTTGCTTT 5.6 0.0056 P10.5 crx- retina AAATGCTGCT (5) 1.9 0.0019 P10.5 crx- retina TCTTAATAAA (3) 1.9 0.0019 P10.5 crx- retina TGGAGGAATG 1.9 0.0019 P10.5 crx+ retina TCCTTGCTTT 1.9 0.0019 P10.5 crx+ retina TGAATAGCAA (8) 1.9 0.0019 P10.5 crx+ retina TGGAGGAATG 1.9 0.0019 Adult retinal TCCTTGCTTT 5.6 0.0056 Adult retinal TCCATATTAA 3.7 0.0037 Adult retinal GATTGGTGTT (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TCTTAAAAAA (9) 1.9 0.0019 Adult retinal TGGAGGAATG 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TGGAGGAATG 3.8 0.0038 ONL AGGTGGGGTG (3) 1.9 0.0019 ONL TCCTTGCTTT 1.9 0.0019 ONL TCTTAAAAAA (9) 1.9 0.0019