Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.187470
5033414K04Rik
RIKEN cDNA 5033414K04 gene
1
75987
Mm.187470
AL024069
expressed sequence AL024069
1
98496
Human Homolog
FLJ20701[hypothetical protein FLJ20701]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTGCAGATC (
3
)
8.2
0.0082
P8 Cb GC
GAGTCGTATT
(
2
)
3.3
0.0033
P8 Cb GC
CCTTGAAAAT (
6
)
1.6
0.0016
P8 Cb GC
TAAAATAAAT
(
6
)
1.6
0.0016
Cb medulloblastoma
TTTGCAGATC (
3
)
6.9
0.0069
P8 GC+1d culture
TTTGCAGATC (
3
)
9.1
0.0091
P8 GC+1d culture
TAAAATAAAT
(
6
)
4.6
0.0046
P8 GC+1d culture
CCTTGAAAAT (
6
)
2.3
0.0023
P8 GC+1d culture
GAGTCGTATT
(
2
)
2.3
0.0023
P8 GC+1d culture
TCAACACATA (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTGCAGATC (
3
)
8.2
0.0082
P8 GC+SHH+1d culture
CCTTGAAAAT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGAAGTCTA
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGTCGTATT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TAAAATAAAT
(
6
)
1.2
0.0012
3T3 fibroblasts
TTTGCAGATC (
3
)
3.5
0.0035
E15 cortex
TTTGCAGATC (
3
)
4.9
0.0049
P1 cortex
CTGAAGTCTA
(
5
)
4.5
0.0045
P1 cortex
TAAAATAAAT
(
6
)
4.5
0.0045
Hypothalamus
TTTGCAGATC (
3
)
14.5
0.0145
Hypothalamus
GCTGTAGTTC (
5
)
3.6
0.0036
E12.5 retina
TTTGCAGATC (
3
)
11.3
0.0113
E14.5 retina
TTTGCAGATC (
3
)
14.6
0.0146
E14.5 retina
CTGAAGTCTA
(
5
)
1.8
0.0018
E14.5 retina
GCTGTAGTTC (
5
)
1.8
0.0018
E14.5 retina
TAAAATAAAT
(
6
)
1.8
0.0018
E16.5 retina
TTTGCAGATC (
3
)
7.2
0.0072
E16.5 retina
TAAAATAAAT
(
6
)
1.8
0.0018
E18.5 retina
TTTGCAGATC (
3
)
7.3
0.0073
E18.5 retina
GAGTCGTATT
(
2
)
5.5
0.0055
E18.5 retina
TAAAATAAAT
(
6
)
3.6
0.0036
P0.5 retina
TTTGCAGATC (
3
)
19.6
0.0196
P0.5 retina
CTGAAGTCTA
(
5
)
2
0.002
P0.5 retina
GAGTCGTATT
(
2
)
2
0.002
P0.5 retina
TAAAATAAAT
(
6
)
2
0.002
P2.5 retina
TTTGCAGATC (
3
)
17.6
0.0176
P2.5 retina
TAAAATAAAT
(
6
)
5.3
0.0053
P2.5 retina
TCAACACATA (
3
)
1.8
0.0018
P4.5 retina
TTTGCAGATC (
3
)
7.9
0.0079
P4.5 retina
CCTTGAAAAT (
6
)
2
0.002
P4.5 retina
GAGTCGTATT
(
2
)
2
0.002
P4.5 retina
TAAAATAAAT
(
6
)
2
0.002
P6.5 retina
TTTGCAGATC (
3
)
28.3
0.0283
P6.5 retina
GAGTCGTATT
(
2
)
3.3
0.0033
P6.5 retina
CCTTGAAAAT (
6
)
1.7
0.0017
P10.5 crx- retina
TTTGCAGATC (
3
)
18.6
0.0186
P10.5 crx- retina
GAGTCGTATT
(
2
)
1.9
0.0019
P10.5 crx- retina
TCAACACATA (
3
)
1.9
0.0019
P10.5 crx+ retina
TTTGCAGATC (
3
)
13.5
0.0135
P10.5 crx+ retina
GAGTCGTATT
(
2
)
3.8
0.0038
P10.5 crx+ retina
TAAAATAAAT
(
6
)
3.8
0.0038
P10.5 crx+ retina
TCAACACATA (
3
)
3.8
0.0038
Adult retinal
TTTGCAGATC (
3
)
14.8
0.0148
Adult retinal
CCTTGAAAAT (
6
)
1.9
0.0019
Adult retinal
CTGAAGTCTA
(
5
)
1.9
0.0019
Adult retinal
GAGTCGTATT
(
2
)
1.9
0.0019
Adult retinal
TCAACACATA (
3
)
1.9
0.0019
ONL
TTTGCAGATC (
3
)
1.9
0.0019
