Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.187554	D530033B14Rik	RIKEN cDNA D530033B14 gene	7		78574
Mm.187554	1600014C10Rik	RIKEN cDNA 1600014C10 gene	7		72244
Gene Ontology	integral to membrane
Human Homolog	C19orf12[chromosome 19 open reading frame 12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGAAACTAA (5) 244.7 0.2447 P8 Cb GC GTGACAACTG (7) 9.8 0.0098 P8 Cb GC TTTCCTTCCT (6) 1.6 0.0016 Cb medulloblastoma GTGAAACTAA (5) 71.7 0.0717 Cb medulloblastoma GTGACAACTG (7) 6.9 0.0069 Cb medulloblastoma CTATATCCTT (2) 2.3 0.0023 Cb medulloblastoma TTTCCTTCCT (6) 2.3 0.0023 P8 GC+1d culture GTGAAACTAA (5) 153 0.153 P8 GC+1d culture GTGACAACTG (7) 12.6 0.0126 P8 GC+1d culture TTTCCTTCCT (6) 2.3 0.0023 P8 GC+1d culture GCTTTTGTGG (5) 1.1 0.0011 P8 GC+1d culture GTGCCAGGCA (6) 1.1 0.0011 P8 GC+SHH+1d culture GTGAAACTAA (5) 240 0.24 P8 GC+SHH+1d culture GTGACAACTG (7) 19.9 0.0199 P8 GC+SHH+1d culture TTTCCTTCCT (6) 7 0.007 P8 GC+SHH+1d culture GCTTTTGTGG (5) 1.2 0.0012 P8 GC+SHH+1d culture GTTCCCCTCC (5) 1.2 0.0012 3T3 fibroblasts GTGAAACTAA (5) 17.5 0.0175 3T3 fibroblasts TTTCCTTCCT (6) 10.5 0.0105 E15 cortex GTGAAACTAA (5) 148.4 0.1484 E15 cortex GTGACAACTG (7) 9.9 0.0099 P1 cortex GTGAAACTAA (5) 54.5 0.0545 P1 cortex GTGACAACTG (7) 9.1 0.0091 Hypothalamus GTGAAACTAA (5) 105 0.105 Hypothalamus CTATATCCTT (2) 1.8 0.0018 Hypothalamus GCTTTTGTGG (5) 1.8 0.0018 Hypothalamus GTGACAACTG (7) 1.8 0.0018 Hypothalamus TTTCCTTCCT (6) 1.8 0.0018 E12.5 retina GTGAAACTAA (5) 478.7 0.4787 E12.5 retina GTGACAACTG (7) 7.5 0.0075 E12.5 retina GCTTTTGTGG (5) 3.8 0.0038 E12.5 retina GTTGGGGTTT (5) 1.9 0.0019 E12.5 retina TTTCCTTCCT (6) 1.9 0.0019 E14.5 retina GTGAAACTAA (5) 269.7 0.2697 E14.5 retina GTGACAACTG (7) 25.5 0.0255 E14.5 retina TTTCCTTCCT (6) 16.4 0.0164 E14.5 retina GCTTTTGTGG (5) 1.8 0.0018 E14.5 retina GTGCCAGGCA (6) 1.8 0.0018 E16.5 retina GTGAAACTAA (5) 182.9 0.1829 E16.5 retina GTGACAACTG (7) 18.1 0.0181 E18.5 retina GTGAAACTAA (5) 611.2 0.6112 E18.5 retina GTGACAACTG (7) 30.9 0.0309 E18.5 retina CTATATCCTT (2) 3.6 0.0036 E18.5 retina TTTCCTTCCT (6) 1.8 0.0018 P0.5 retina GTGAAACTAA (5) 162.9 0.1629 P0.5 retina GTGACAACTG (7) 5.9 0.0059 P0.5 retina TTTCCTTCCT (6) 3.9 0.0039 P0.5 retina GTTCCCCTCC (5) 2 0.002 P2.5 retina GTGAAACTAA (5) 225.2 0.2252 P2.5 retina GTGACAACTG (7) 15.8 0.0158 P2.5 retina TTTCCTTCCT (6) 3.5 0.0035 P4.5 retina GTGAAACTAA (5) 277.4 0.2774 P4.5 retina GTGACAACTG (7) 19.8 0.0198 P4.5 retina GCTTTTGTGG (5) 2 0.002 P4.5 retina GTTCCCCTCC (5) 2 0.002 P4.5 retina TTTCCTTCCT (6) 2 0.002 P6.5 retina GTGAAACTAA (5) 120 0.12 P6.5 retina GTGACAACTG (7) 8.3 0.0083 P6.5 retina GCTTTTGTGG (5) 1.7 0.0017 P10.5 crx- retina GTGAAACTAA (5) 37.2 0.0372 P10.5 crx- retina GTGACAACTG (7) 3.7 0.0037 P10.5 crx- retina GTTGGGGTTT (5) 3.7 0.0037 P10.5 crx- retina CTATATCCTT (2) 1.9 0.0019 P10.5 crx- retina TTTCCTTCCT (6) 1.9 0.0019 P10.5 crx+ retina GTGAAACTAA (5) 113.4 0.1134 P10.5 crx+ retina GTGACAACTG (7) 13.5 0.0135 P10.5 crx+ retina GCTTTTGTGG (5) 3.8 0.0038 P10.5 crx+ retina TTTCCTTCCT (6) 1.9 0.0019 Adult retinal GTGAAACTAA (5) 53.7 0.0537 Adult retinal TTTCCTTCCT (6) 9.3 0.0093 Adult retinal GTGACAACTG (7) 3.7 0.0037 Adult retinal GTGCCAGGCA (6) 3.7 0.0037 Adult retinal CTATATCCTT (2) 1.9 0.0019 ONL GTGAAACTAA (5) 21.1 0.0211 ONL GTGACAACTG (7) 13.4 0.0134 ONL TTTCCTTCCT (6) 3.8 0.0038 ONL GCTTTTGTGG (5) 1.9 0.0019