Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.188105
2010111I01Rik
RIKEN cDNA 2010111I01 gene
13
72061
Mm.188105
2300006M17Rik
RIKEN cDNA 2300006M17 gene
13
69466
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 21 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 29 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
ATGAATTGTT (
4
)
2.3
0.0023
P8 GC+1d culture
GCCGTCCGTT (
4
)
2.3
0.0023
P8 GC+1d culture
ATGAATTGTT (
4
)
1.1
0.0011
P8 GC+1d culture
GCACAGAGGG
(
9
)
1.1
0.0011
P8 GC+SHH+1d culture
ATGAATTGTT (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCGTCCGTT (
4
)
1.2
0.0012
3T3 fibroblasts
GCCGTCCGTT (
4
)
7
0.007
3T3 fibroblasts
AGCCCAGCCA
(
5
)
3.5
0.0035
E15 cortex
GCCGTCCGTT (
4
)
4.9
0.0049
P1 cortex
TGACACCTCC
(
4
)
4.5
0.0045
Hypothalamus
GTGGTACATA
(
4
)
1.8
0.0018
E12.5 retina
ATGAATTGTT (
4
)
1.9
0.0019
E16.5 retina
ATGAATTGTT (
4
)
3.6
0.0036
E16.5 retina
GTGGTACATA
(
4
)
3.6
0.0036
P2.5 retina
ATGAATTGTT (
4
)
5.3
0.0053
P2.5 retina
GTGGTACATA
(
4
)
1.8
0.0018
P2.5 retina
TGACACCTCC
(
4
)
1.8
0.0018
P4.5 retina
GCACAGAGGG
(
9
)
2
0.002
P4.5 retina
TGACACCTCC
(
4
)
2
0.002
P6.5 retina
GCACAGAGGG
(
9
)
1.7
0.0017
P10.5 crx- retina
ATGAATTGTT (
4
)
3.7
0.0037
P10.5 crx- retina
AGCCCAGCCA
(
5
)
1.9
0.0019
P10.5 crx+ retina
AGCCCAGCCA
(
5
)
3.8
0.0038
P10.5 crx+ retina
ACCTTGGCTG (
4
)
1.9
0.0019
Adult retinal
ACCTTGGCTG (
4
)
27.8
0.0278
Adult retinal
ATGAATTGTT (
4
)
1.9
0.0019
ONL
ACCTTGGCTG (
4
)
21.1
0.0211
ONL
AGCCCAGCCA
(
5
)
1.9
0.0019
ONL
TGACACCTCC
(
4
)
1.9
0.0019
