Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.188544	Rpn1	ribophorin I	6	6 38.0 cM	103963
Gene Ontology	dolichyl-diphosphooligosaccharide-protein glycotransferase activity | endoplasmic reticulum | extracellular space | integral to membrane | protein amino acid glycosylation | transferase activity
Human Homolog	RPN1[ribophorin I]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAATGTAG (2) 6.5 0.0065 P8 Cb GC GTTTTTTAAA (10) 6.5 0.0065 P8 Cb GC GCCTGGCAAA (2) 1.6 0.0016 P8 Cb GC GCTGAAGGGG (6) 1.6 0.0016 Cb medulloblastoma AAGAATGTAG (2) 11.6 0.0116 Cb medulloblastoma GTTTTTTAAA (10) 9.2 0.0092 Cb medulloblastoma CATACGCTCA 2.3 0.0023 P8 GC+1d culture GTTTTTTAAA (10) 11.4 0.0114 P8 GC+1d culture AAGAATGTAG (2) 6.8 0.0068 P8 GC+1d culture CATACGCTCA 1.1 0.0011 P8 GC+1d culture GAGAAACTAA 1.1 0.0011 P8 GC+1d culture GCCTGGCAAA (2) 1.1 0.0011 P8 GC+1d culture GTTTTTTTAA (7) 1.1 0.0011 P8 GC+SHH+1d culture GTTTTTTAAA (10) 14.1 0.0141 P8 GC+SHH+1d culture CATACGCTCA 2.3 0.0023 P8 GC+SHH+1d culture AAGAATGTAG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTGAAGGGG 1.2 0.0012 3T3 fibroblasts AAGAATGTAG (2) 7 0.007 E15 cortex GTTTTTTAAA (10) 4.9 0.0049 P1 cortex AAGAATGTAG (2) 4.5 0.0045 P1 cortex GTTTTTTAAA (10) 4.5 0.0045 Hypothalamus AAGAATGTAG (2) 30.8 0.0308 Hypothalamus CATACGCTCA 3.6 0.0036 Hypothalamus GCTGAAGGGG (6) 1.8 0.0018 Hypothalamus GTTTTTTAAA (10) 1.8 0.0018 E12.5 retina GTTTTTTAAA (10) 11.3 0.0113 E12.5 retina AAGAATGTAG (2) 9.4 0.0094 E12.5 retina AGGAAGAAAC (8) 1.9 0.0019 E12.5 retina CATACGCTCA 1.9 0.0019 E14.5 retina GTTTTTTAAA (10) 9.1 0.0091 E14.5 retina AAGAATGTAG (2) 7.3 0.0073 E14.5 retina CATACGCTCA 1.8 0.0018 E14.5 retina CTTGAAGGGG 1.8 0.0018 E14.5 retina GCCTGGCAAA (2) 1.8 0.0018 E16.5 retina AAGAATGTAG (2) 9.1 0.0091 E16.5 retina CATACGCTCA 5.4 0.0054 E16.5 retina GTTTTTTAAA (10) 5.4 0.0054 E18.5 retina GTTTTTTAAA (10) 9.1 0.0091 E18.5 retina GAGAAACTAA 5.5 0.0055 E18.5 retina CATACGCTCA 3.6 0.0036 E18.5 retina AAGAATGTAG (2) 1.8 0.0018 P0.5 retina GTTTTTTAAA (10) 5.9 0.0059 P0.5 retina AAGAATGTAG (2) 2 0.002 P0.5 retina AGGAAGAAAC (8) 2 0.002 P0.5 retina GTTTTTTTAA (7) 2 0.002 P2.5 retina GTTTTTTAAA (10) 15.8 0.0158 P2.5 retina CATACGCTCA 3.5 0.0035 P2.5 retina CTTGAAGGGG 1.8 0.0018 P4.5 retina GTTTTTTAAA (10) 17.8 0.0178 P4.5 retina AAGAATGTAG (2) 2 0.002 P4.5 retina GTTTTTTTAA (7) 2 0.002 P6.5 retina GTTTTTTAAA (10) 6.7 0.0067 P6.5 retina AAGAATGTAG (2) 3.3 0.0033 P6.5 retina CATACGCTCA 3.3 0.0033 P6.5 retina GTTTTTTTAA (7) 1.7 0.0017 P10.5 crx- retina CATACGCTCA 7.4 0.0074 P10.5 crx- retina GTTTTTTAAA (10) 3.7 0.0037 P10.5 crx+ retina GTTTTTTAAA (10) 9.6 0.0096 P10.5 crx+ retina CATACGCTCA 1.9 0.0019 Adult retinal AAGAATGTAG (2) 3.7 0.0037 Adult retinal GTTTTTTAAA (10) 3.7 0.0037 Adult retinal GCTGAAGGGG (6) 1.9 0.0019 Adult retinal GTTTTTTTAA (7) 1.9 0.0019 ONL GTTTTTTAAA (10) 9.6 0.0096 ONL AAGAATGTAG (2) 1.9 0.0019 ONL CATACGCTCA 1.9 0.0019 ONL GTTTTTTTAA (7) 1.9 0.0019