Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18856	Mapk6	mitogen-activated protein kinase 6	9	9 38.0 cM	50772
Gene Ontology	ATP binding | cell cycle | kinase activity | MAP kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	MAPK6[mitogen-activated protein kinase 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TCACTGCTCA 9.8 0.0098 P8 Cb GC TCCCTGTGGT (4) 4.9 0.0049 P8 Cb GC AATAAAAAAA (9) 1.6 0.0016 P8 Cb GC AATAAAATTA (4) 1.6 0.0016 P8 Cb GC GACAGCCTCA (9) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma AATAAAAAAA (9) 6.9 0.0069 Cb medulloblastoma AATAAAATTA (4) 2.3 0.0023 Cb medulloblastoma TCCCTGTGGT (4) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TCACTGCTCA 13.7 0.0137 P8 GC+1d culture AATAAAATTA (4) 4.6 0.0046 P8 GC+1d culture AAATGCGTTG 1.1 0.0011 P8 GC+1d culture AATAAAAAAA (9) 1.1 0.0011 P8 GC+1d culture TCCCTGTGGT (4) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TCCCTGTGGT (4) 5.9 0.0059 P8 GC+SHH+1d culture AAATGCGTTG 3.5 0.0035 P8 GC+SHH+1d culture AATAAAAAAA (9) 2.3 0.0023 P8 GC+SHH+1d culture AATAAAATTA (4) 2.3 0.0023 P8 GC+SHH+1d culture TCACTGCTCA 2.3 0.0023 P8 GC+SHH+1d culture GACAGCCTCA (9) 1.2 0.0012 P8 GC+SHH+1d culture TACGTTAAGT 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TCCCTGTGGT (4) 7 0.007 3T3 fibroblasts AATAAAAAAA (9) 3.5 0.0035 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex AATAAAAAAA (9) 4.9 0.0049 E15 cortex GAGGGGGGGG (9) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex AATAAAATTA (4) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus AATAAAAAAA (9) 5.4 0.0054 Hypothalamus AATAAAATTA (4) 1.8 0.0018 Hypothalamus TCCCTGTGGT (4) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TCACTGCTCA 15 0.015 E12.5 retina TCCCTGTGGT (4) 5.6 0.0056 E12.5 retina AATAAAAAAA (9) 3.8 0.0038 E12.5 retina AATAAAATTA (4) 3.8 0.0038 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TCCCTGTGGT (4) 14.6 0.0146 E14.5 retina AATAAAAAAA (9) 1.8 0.0018 E14.5 retina AATAAAATTA (4) 1.8 0.0018 E14.5 retina GAGGGGGGGG (9) 1.8 0.0018 E14.5 retina TCACTGCTCA 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TCACTGCTCA 12.7 0.0127 E16.5 retina TCCCTGTGGT (4) 10.9 0.0109 E16.5 retina AATAAAATTA (4) 1.8 0.0018 E16.5 retina TACGTTAAGT 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina AATAAAATTA (4) 5.5 0.0055 E18.5 retina TCCCTGTGGT (4) 3.6 0.0036 E18.5 retina AATAAAAAAA (9) 1.8 0.0018 E18.5 retina TCACTGCTCA 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TCACTGCTCA 5.9 0.0059 P0.5 retina TCCCTGTGGT (4) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TCACTGCTCA 8.8 0.0088 P2.5 retina TCCCTGTGGT (4) 5.3 0.0053 P2.5 retina AATAAAATTA (4) 3.5 0.0035 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina AATAAAATTA (4) 5.9 0.0059 P4.5 retina TCACTGCTCA 5.9 0.0059 P4.5 retina AATAAAAAAA (9) 4 0.004 P4.5 retina TCCCTGTGGT (4) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina AATAAAATTA (4) 11.7 0.0117 P6.5 retina TCACTGCTCA 8.3 0.0083 P6.5 retina AATAAAAAAA (9) 3.3 0.0033 P6.5 retina AAATGCGTTG 1.7 0.0017 P6.5 retina TACGTTAAGT 1.7 0.0017 P6.5 retina TCCCTGTGGT (4) 1.7 0.0017 P10.5 crx- retina TCCCTGTGGT (4) 13 0.013 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TCACTGCTCA 5.6 0.0056 P10.5 crx- retina GAGGGGGGGG (9) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TCACTGCTCA 13.5 0.0135 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TCACTGCTCA 3.7 0.0037 Adult retinal AATAAAAAAA (9) 1.9 0.0019 Adult retinal AATAAAATTA (4) 1.9 0.0019 Adult retinal TCCCTGTGGT (4) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL GACAGCCTCA (9) 1.9 0.0019