Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1886	Thoc4	THO complex 4	11		21681
Gene Ontology	mRNA processing | mRNA-nucleus export | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | protein folding | RNA binding | single-stranded DNA binding | spliceosome complex | transport
Human Homolog	THOC4[THO complex 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAATTTACA 3.3 0.0033 P8 Cb GC CCTAAAAAAA (9) 3.3 0.0033 P8 Cb GC GTGCTAATCA (2) 3.3 0.0033 P8 Cb GC AGTTTTTAGA 1.6 0.0016 P8 Cb GC TAAAGTTTTT (3) 1.6 0.0016 Cb medulloblastoma CCTAAAAAAA (9) 4.6 0.0046 Cb medulloblastoma TAAAGTTTTT (3) 4.6 0.0046 P8 GC+1d culture CCAATTTACA 3.4 0.0034 P8 GC+1d culture CCTAAAAAAA (9) 1.1 0.0011 P8 GC+1d culture GTGCTAATCA (2) 1.1 0.0011 P8 GC+1d culture TAAAGTTTTT (3) 1.1 0.0011 P8 GC+SHH+1d culture AGTTTTTAGA 5.9 0.0059 P8 GC+SHH+1d culture CCAATTTACA 5.9 0.0059 P8 GC+SHH+1d culture GTGCTAATCA (2) 3.5 0.0035 P8 GC+SHH+1d culture TAAAGTTTTT (3) 3.5 0.0035 E15 cortex CCAATTTACA 9.9 0.0099 E15 cortex GTGCTAATCA (2) 4.9 0.0049 E15 cortex TAAAGTTTTT (3) 4.9 0.0049 P1 cortex CCAATTTACA 9.1 0.0091 Hypothalamus CCAATTTACA 3.6 0.0036 Hypothalamus GTGCTAATCA (2) 3.6 0.0036 E12.5 retina CCAATTTACA 3.8 0.0038 E12.5 retina AGTTTTTAGA 1.9 0.0019 E12.5 retina GTGCTAATCA (2) 1.9 0.0019 E14.5 retina TAAAGTTTTT (3) 12.8 0.0128 E14.5 retina CCAATTTACA 5.5 0.0055 E14.5 retina GTGCTAATCA (2) 5.5 0.0055 E16.5 retina CCAATTTACA 7.2 0.0072 E16.5 retina TAAAGTTTTT (3) 5.4 0.0054 E16.5 retina CCTAAAAAAA (9) 1.8 0.0018 E18.5 retina CCAATTTACA 7.3 0.0073 E18.5 retina CCTAAAAAAA (9) 3.6 0.0036 E18.5 retina TAAAGTTTTT (3) 3.6 0.0036 E18.5 retina GTGCTAATCA (2) 1.8 0.0018 P0.5 retina TAAAGTTTTT (3) 7.9 0.0079 P0.5 retina CCTAAAAAAA (9) 5.9 0.0059 P0.5 retina CCAATTTACA 2 0.002 P0.5 retina GTGCTAATCA (2) 2 0.002 P2.5 retina CCAATTTACA 3.5 0.0035 P2.5 retina GTGCTAATCA (2) 3.5 0.0035 P2.5 retina AGTTTTTAGA 1.8 0.0018 P2.5 retina TAAAGTTTTT (3) 1.8 0.0018 P4.5 retina GTGCTAATCA (2) 4 0.004 P4.5 retina CCAATTTACA 2 0.002 P4.5 retina CCTAAAAAAA (9) 2 0.002 P6.5 retina CCAATTTACA 3.3 0.0033 P6.5 retina CCTAAAAAAA (9) 1.7 0.0017 P6.5 retina GTGCTAATCA (2) 1.7 0.0017 P10.5 crx- retina TAAAGTTTTT (3) 3.7 0.0037 P10.5 crx- retina CCTAAAAAAA (9) 1.9 0.0019 P10.5 crx+ retina CCTAAAAAAA (9) 3.8 0.0038 P10.5 crx+ retina GTGCTAATCA (2) 3.8 0.0038 P10.5 crx+ retina AGTTTTTAGA 1.9 0.0019 P10.5 crx+ retina CCAATTTACA 1.9 0.0019 Adult retinal CCTAAAAAAA (9) 3.7 0.0037 Adult retinal TAAAGTTTTT (3) 1.9 0.0019 ONL GTGCTAATCA (2) 1.9 0.0019