Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.189102	5730564G15Rik	RIKEN cDNA 5730564G15 gene	1		70657
Mm.189102	AI255230	expressed sequence AI255230	1		98285
Mm.189102	2810047L02Rik	RIKEN cDNA 2810047L02 gene	1		76843
Human Homolog	RAMP[RA-regulated nuclear matrix-associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC AATGAGAAAA (6) 4.9 0.0049 P8 Cb GC CTTTTAATCC (33) 3.3 0.0033 P8 Cb GC GGAAGGGAAA (7) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TGTAACAAAG (5) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture AATGAGAAAA (6) 1.1 0.0011 P8 GC+1d culture CAGCAGCTTT (4) 1.1 0.0011 P8 GC+1d culture CTTTTAATCC (33) 1.1 0.0011 P8 GC+1d culture GGAAGGGAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture AATGAGAAAA (6) 1.2 0.0012 P8 GC+SHH+1d culture CTTTTAATCC (33) 1.2 0.0012 P8 GC+SHH+1d culture TGTAACAAAG (5) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CTTTTAATCC (33) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CAGCAGCTTT (4) 3.6 0.0036 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina AGGGAGCAAG (4) 3.8 0.0038 E12.5 retina AATGAGAAAA (6) 1.9 0.0019 E12.5 retina CTTTTAATCC (33) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina AATGAGAAAA (6) 1.8 0.0018 E14.5 retina CTTTTAATCC (33) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CTTTTAATCC (33) 7.2 0.0072 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina AATGAGAAAA (6) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TGTAACAAAG (5) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina AATGAGAAAA (6) 1.8 0.0018 P2.5 retina AGGGAGCAAG (4) 1.8 0.0018 P2.5 retina TGTAACAAAG (5) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina AATGAGAAAA (6) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina AATGAGAAAA (6) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CTTTTAATCC (33) 3.7 0.0037 P10.5 crx- retina AATGAGAAAA (6) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina AATGAGAAAA (6) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CTTTTAATCC (33) 3.7 0.0037 Adult retinal GGAAGGGAAA (7) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CTTTTAATCC (33) 5.7 0.0057 ONL AATGAGAAAA (6) 1.9 0.0019 ONL CAGCAGCTTT (4) 1.9 0.0019