Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.18936
BC051080
cDNA sequence BC051080
10
237422
Human Homolog
hSyn[brain synembryn]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGTGTTTAC
(
3
)
1.6
0.0016
P8 Cb GC
GATGAAGAGC (
7
)
1.6
0.0016
P8 Cb GC
GCAGCTGGCC (
5
)
1.6
0.0016
P8 Cb GC
GCAGCTGTCC (
3
)
1.6
0.0016
P8 Cb GC
GCCCCAGACT
(
5
)
1.6
0.0016
Cb medulloblastoma
GCCCCAGACT
(
5
)
4.6
0.0046
Cb medulloblastoma
CGCATACATA
(
4
)
2.3
0.0023
Cb medulloblastoma
TTTTAAACTG (
9
)
2.3
0.0023
P8 GC+1d culture
CGCATACATA
(
4
)
4.6
0.0046
P8 GC+1d culture
TTTTAAACTG (
9
)
4.6
0.0046
P8 GC+1d culture
GCAGCTGGCC (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
CGCATACATA
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
GCCCCAGACT
(
5
)
4.7
0.0047
P8 GC+SHH+1d culture
TTTTAAACTG (
9
)
2.3
0.0023
E15 cortex
GCCCCAGACT
(
5
)
9.9
0.0099
E15 cortex
GCAGCTGTCC (
3
)
4.9
0.0049
Hypothalamus
CCAAGTGTTC (
3
)
1.8
0.0018
Hypothalamus
GCCCCAGACT
(
5
)
1.8
0.0018
Hypothalamus
TTTTAAACTG (
9
)
1.8
0.0018
E12.5 retina
CCAAGTGTTC (
3
)
1.9
0.0019
E12.5 retina
CGCATACATA
(
4
)
1.9
0.0019
E14.5 retina
CGCATACATA
(
4
)
3.6
0.0036
E14.5 retina
GCAGCTGGCC (
5
)
1.8
0.0018
E16.5 retina
CGCATACATA
(
4
)
7.2
0.0072
E16.5 retina
TTTTAAACTG (
9
)
3.6
0.0036
E16.5 retina
GCAGCTGGCC (
5
)
1.8
0.0018
E16.5 retina
GCCCCAGACT
(
5
)
1.8
0.0018
E18.5 retina
CTGTGTTTAC
(
3
)
1.8
0.0018
E18.5 retina
GCAGCTGTCC (
3
)
1.8
0.0018
P0.5 retina
GCAGCTGGCC (
5
)
3.9
0.0039
P0.5 retina
GCCCCAGACT
(
5
)
2
0.002
P2.5 retina
CGCATACATA
(
4
)
3.5
0.0035
P2.5 retina
CCAAGTGTTC (
3
)
1.8
0.0018
P4.5 retina
CGCATACATA
(
4
)
4
0.004
P4.5 retina
CTGTGTTTAC
(
3
)
2
0.002
P6.5 retina
CGCATACATA
(
4
)
10
0.01
P6.5 retina
TTTTAAACTG (
9
)
3.3
0.0033
P6.5 retina
CCAAGTGTTC (
3
)
1.7
0.0017
P6.5 retina
CTGTGTTTAC
(
3
)
1.7
0.0017
P6.5 retina
GATGAAGAGC (
7
)
1.7
0.0017
P10.5 crx- retina
CGCATACATA
(
4
)
7.4
0.0074
P10.5 crx- retina
GCCCCAGACT
(
5
)
3.7
0.0037
P10.5 crx- retina
CCAAGTGTTC (
3
)
1.9
0.0019
P10.5 crx+ retina
CGCATACATA
(
4
)
15.4
0.0154
P10.5 crx+ retina
CCAAGTGTCC
(
2
)
1.9
0.0019
P10.5 crx+ retina
CTGTGTTTAC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TTTTAAACTG (
9
)
1.9
0.0019
Adult retinal
CGCATACATA
(
4
)
13
0.013
Adult retinal
CCAAGTGTCC
(
2
)
5.6
0.0056
Adult retinal
CTGTGTTTAC
(
3
)
3.7
0.0037
Adult retinal
GATGAAGAGC (
7
)
1.9
0.0019
Adult retinal
GCCCCAGACT
(
5
)
1.9
0.0019
ONL
CGCATACATA
(
4
)
11.5
0.0115
ONL
CCAAGTGTCC
(
2
)
5.7
0.0057
ONL
TTTTAAACTG (
9
)
5.7
0.0057
ONL
GATGAAGAGC (
7
)
1.9
0.0019
