Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.19080
Gtpbp1
GTP binding protein 1
15
14904
Gene Ontology
GTP binding
|
protein biosynthesis
Human Homolog
GTPBP1[GTP binding protein 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGAAAAAAAA (
81
)
27.7
0.0277
P8 Cb GC
GACTGACGAG
(
2
)
11.4
0.0114
P8 Cb GC
TGTATGTGTG (
9
)
1.6
0.0016
Cb medulloblastoma
TGAAAAAAAA (
81
)
78.6
0.0786
Cb medulloblastoma
GACTGACGAG
(
2
)
4.6
0.0046
P8 GC+1d culture
TGAAAAAAAA (
81
)
26.3
0.0263
P8 GC+1d culture
GACTGACGAG
(
2
)
11.4
0.0114
P8 GC+1d culture
TGTATGTGTG (
9
)
1.1
0.0011
P8 GC+SHH+1d culture
TGAAAAAAAA (
81
)
57.4
0.0574
P8 GC+SHH+1d culture
GACTGACGAG
(
2
)
17.6
0.0176
P8 GC+SHH+1d culture
GTGGCAGCCT (
3
)
1.2
0.0012
3T3 fibroblasts
TGAAAAAAAA (
81
)
7
0.007
3T3 fibroblasts
GACTGACGAG
(
2
)
3.5
0.0035
E15 cortex
TGAAAAAAAA (
81
)
29.7
0.0297
P1 cortex
TGAAAAAAAA (
81
)
4.5
0.0045
P1 cortex
TGTATGTGTG (
9
)
4.5
0.0045
Hypothalamus
TGAAAAAAAA (
81
)
36.2
0.0362
Hypothalamus
GACTGACGAG
(
2
)
3.6
0.0036
E12.5 retina
TGAAAAAAAA (
81
)
31.9
0.0319
E12.5 retina
GACTGACGAG
(
2
)
13.1
0.0131
E12.5 retina
CCACCTTCCT
(
4
)
1.9
0.0019
E14.5 retina
TGAAAAAAAA (
81
)
49.2
0.0492
E14.5 retina
GACTGACGAG
(
2
)
10.9
0.0109
E14.5 retina
CCACCTTCCT
(
4
)
3.6
0.0036
E14.5 retina
GTGGTGGGAG
(
4
)
1.8
0.0018
E14.5 retina
TGTATGTGTG (
9
)
1.8
0.0018
E16.5 retina
TGAAAAAAAA (
81
)
16.3
0.0163
E16.5 retina
GGGCAGTGGT
(
2
)
9.1
0.0091
E16.5 retina
CCACCTTCCT
(
4
)
1.8
0.0018
E16.5 retina
TGTATGTGTG (
9
)
1.8
0.0018
E18.5 retina
TGAAAAAAAA (
81
)
74.6
0.0746
E18.5 retina
GACTGACGAG
(
2
)
14.6
0.0146
E18.5 retina
TGTATGTGTG (
9
)
1.8
0.0018
P0.5 retina
TGAAAAAAAA (
81
)
15.7
0.0157
P0.5 retina
GACTGACGAG
(
2
)
5.9
0.0059
P0.5 retina
CCACCTTCCT
(
4
)
3.9
0.0039
P0.5 retina
GGGCAGTGGT
(
2
)
2
0.002
P2.5 retina
TGAAAAAAAA (
81
)
42.2
0.0422
P2.5 retina
GACTGACGAG
(
2
)
24.6
0.0246
P2.5 retina
GTGGCAGCCT (
3
)
1.8
0.0018
P4.5 retina
TGAAAAAAAA (
81
)
43.6
0.0436
P4.5 retina
GACTGACGAG
(
2
)
17.8
0.0178
P4.5 retina
GGGCAGTGGT
(
2
)
2
0.002
P6.5 retina
TGAAAAAAAA (
81
)
33.3
0.0333
P6.5 retina
GACTGACGAG
(
2
)
26.7
0.0267
P10.5 crx- retina
GACTGACGAG
(
2
)
16.7
0.0167
P10.5 crx- retina
TGAAAAAAAA (
81
)
9.3
0.0093
P10.5 crx- retina
GGGCAGTGGT
(
2
)
3.7
0.0037
P10.5 crx+ retina
GACTGACGAG
(
2
)
25
0.025
P10.5 crx+ retina
TGAAAAAAAA (
81
)
19.2
0.0192
P10.5 crx+ retina
GTGGTGGGAG
(
4
)
1.9
0.0019
Adult retinal
TGAAAAAAAA (
81
)
13
0.013
Adult retinal
GACTGACGAG
(
2
)
9.3
0.0093
Adult retinal
GTGGTGGGAG
(
4
)
1.9
0.0019
Adult retinal
TGTATGTGTG (
9
)
1.9
0.0019
ONL
GACTGACGAG
(
2
)
19.2
0.0192
ONL
TGAAAAAAAA (
81
)
19.2
0.0192
ONL
GTGGCAGCCT (
3
)
1.9
0.0019
ONL
TGTATGTGTG (
9
)
1.9
0.0019
