Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.19091
5730409F24Rik
RIKEN cDNA 5730409F24 gene
19
107305
Human Homolog
PRP19[PRP19/PSO4 homolog (S. cerevisiae)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 103 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGTGGGGGGG (
15
)
27.7
0.0277
P8 Cb GC
CCTGCTCTGT
(
2
)
17.9
0.0179
P8 Cb GC
TCTGGAATAA (
2
)
6.5
0.0065
P8 Cb GC
GATATGAATG (
4
)
1.6
0.0016
P8 Cb GC
GATTTGGGTG
(
2
)
1.6
0.0016
Cb medulloblastoma
GGTGGGGGGG (
15
)
23.1
0.0231
Cb medulloblastoma
CCTGCTCTGT
(
2
)
13.9
0.0139
Cb medulloblastoma
GTGCACAGCT (
2
)
2.3
0.0023
P8 GC+1d culture
GGTGGGGGGG (
15
)
18.3
0.0183
P8 GC+1d culture
CCTGCTCTGT
(
2
)
9.1
0.0091
P8 GC+1d culture
TCTGGAATAA (
2
)
9.1
0.0091
P8 GC+1d culture
GCTGAGAAAT
(
9
)
2.3
0.0023
P8 GC+1d culture
GTGCTTCCCA
(
2
)
2.3
0.0023
P8 GC+1d culture
GATATGAATG (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GGTGGGGGGG (
15
)
17.6
0.0176
P8 GC+SHH+1d culture
CCTGCTCTGT
(
2
)
16.4
0.0164
P8 GC+SHH+1d culture
TCTGGAATAA (
2
)
5.9
0.0059
P8 GC+SHH+1d culture
GATATGAATG (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
GTGCTTCCCA
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
GATTTGGGTG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTGAGAAAT
(
9
)
2.3
0.0023
P8 GC+SHH+1d culture
GAACAGCTGC (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GATGGCAATG
(
5
)
1.2
0.0012
3T3 fibroblasts
CCTGCTCTGT
(
2
)
14
0.014
3T3 fibroblasts
GGTGGGGGGG (
15
)
10.5
0.0105
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
E15 cortex
GGTGGGGGGG (
15
)
39.6
0.0396
E15 cortex
CCTGCTCTGT
(
2
)
9.9
0.0099
E15 cortex
CCCTGCCCAC (
9
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
E15 cortex
GTGCTTCCCA
(
2
)
4.9
0.0049
P1 cortex
CCTGCTCTGT
(
2
)
18.2
0.0182
P1 cortex
CAGGACACTG
9.1
0.0091
P1 cortex
GGTGGGGGGG (
15
)
9.1
0.0091
Hypothalamus
GGTGGGGGGG (
15
)
10.9
0.0109
Hypothalamus
TCTGGAATAA (
2
)
5.4
0.0054
Hypothalamus
CCTGCTCTGT
(
2
)
3.6
0.0036
Hypothalamus
GAACAGCTGC (
6
)
1.8
0.0018
Hypothalamus
GACAGGAGCC
(
5
)
1.8
0.0018
Hypothalamus
GTGCACAGCT (
2
)
1.8
0.0018
E12.5 retina
CCTGCTCTGT
(
2
)
15
0.015
E12.5 retina
GGTGGGGGGG (
15
)
11.3
0.0113
E12.5 retina
TCTGGAATAA (
2
)
5.6
0.0056
E12.5 retina
GATATGAATG (
4
)
3.8
0.0038
E12.5 retina
CCCTGCCCAC (
9
)
1.9
0.0019
E14.5 retina
CCTGCTCTGT
(
2
)
12.8
0.0128
E14.5 retina
GATATGAATG (
4
)
5.5
0.0055
E14.5 retina
GGTGGGGGGG (
15
)
5.5
0.0055
E14.5 retina
TCTGGAATAA (
2
)
5.5
0.0055
E14.5 retina
GAACAGCTGC (
6
)
3.6
0.0036
E16.5 retina
GGTGGGGGGG (
15
)
5.4
0.0054
E16.5 retina
CCTGCTCTGT
(
2
)
3.6
0.0036
E16.5 retina
GACAGGAGCC
(
5
)
3.6
0.0036
E16.5 retina
GATATGAATG (
4
)
3.6
0.0036
E16.5 retina
GTGCACAGCT (
2
)
1.8
0.0018
E18.5 retina
GGTGGGGGGG (
15
)
14.6
0.0146
E18.5 retina
CCTGCTCTGT
(
2
)
7.3
0.0073
E18.5 retina
GAACAGCTGC (
6
)
1.8
0.0018
E18.5 retina
GACAGGAGCC
(
5
)
1.8
0.0018
P0.5 retina
GGTGGGGGGG (
15
)
19.6
0.0196
P0.5 retina
CCTGCTCTGT
(
2
)
9.8
0.0098
P0.5 retina
TCTGGAATAA (
2
)
5.9
0.0059
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
GTGCTTCCCA
(
2
)
3.9
0.0039
P2.5 retina
GGTGGGGGGG (
15
)
24.6
0.0246
P2.5 retina
CCTGCTCTGT
(
2
)
14.1
0.0141
P2.5 retina
GATATGAATG (
4
)
3.5
0.0035
P2.5 retina
TCTGGAATAA (
2
)
3.5
0.0035
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
GGTGGGGGGG (
15
)
15.9
0.0159
P4.5 retina
CCTGCTCTGT
(
2
)
7.9
0.0079
P4.5 retina
GATATGAATG (
4
)
4
0.004
P4.5 retina
TCTGGAATAA (
2
)
4
0.004
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
GGTGGGGGGG (
15
)
15
0.015
P6.5 retina
CCTGCTCTGT
(
2
)
13.3
0.0133
P6.5 retina
GATATGAATG (
4
)
5
0.005
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
CAGGACACTG
1.7
0.0017
P6.5 retina
CCCTGCCCAC (
9
)
1.7
0.0017
P6.5 retina
GATGGCAATG
(
5
)
1.7
0.0017
P6.5 retina
GTGCTTCCCA
(
2
)
1.7
0.0017
P10.5 crx- retina
CCTGCTCTGT
(
2
)
13
0.013
P10.5 crx- retina
GGTGGGGGGG (
15
)
13
0.013
P10.5 crx- retina
TCTGGAATAA (
2
)
7.4
0.0074
P10.5 crx- retina
GAACAGCTGC (
6
)
1.9
0.0019
P10.5 crx- retina
GTGCACAGCT (
2
)
1.9
0.0019
P10.5 crx+ retina
GGTGGGGGGG (
15
)
30.8
0.0308
P10.5 crx+ retina
CCTGCTCTGT
(
2
)
9.6
0.0096
P10.5 crx+ retina
GACAGGAGCC
(
5
)
1.9
0.0019
P10.5 crx+ retina
GATGGCAATG
(
5
)
1.9
0.0019
P10.5 crx+ retina
TCTGGAATAA (
2
)
1.9
0.0019
Adult retinal
GGTGGGGGGG (
15
)
13
0.013
Adult retinal
TCTGGAATAA (
2
)
5.6
0.0056
Adult retinal
CCTGCTCTGT
(
2
)
3.7
0.0037
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
GGTGGGGGGG (
15
)
15.3
0.0153
ONL
CCTGCTCTGT
(
2
)
5.7
0.0057
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
TCTGGAATAA (
2
)
3.8
0.0038
ONL
GATATGAATG (
4
)
1.9
0.0019
ONL
GCTGAGAAAT
(
9
)
1.9
0.0019
ONL
GTGCTTCCCA
(
2
)
1.9
0.0019
