Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.19169
Txnl1
thioredoxin-like 1
18
53382
Mm.19169
AA407787
expressed sequence AA407787
18
106842
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 62 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGTTGTAAA
(
2
)
9.8
0.0098
P8 Cb GC
TGTATGTGAG
(
5
)
1.6
0.0016
Cb medulloblastoma
CAGTTGTAAA
(
2
)
13.9
0.0139
Cb medulloblastoma
TATCACGATT
(
2
)
4.6
0.0046
Cb medulloblastoma
AAAAGTTGTA
(
9
)
2.3
0.0023
P8 GC+1d culture
CAGTTGTAAA
(
2
)
17.1
0.0171
P8 GC+1d culture
AAAAGTTGTA
(
9
)
1.1
0.0011
P8 GC+1d culture
AAGTTTCAAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGTTGTAAA
(
2
)
15.2
0.0152
P8 GC+SHH+1d culture
AAGTTTCAAG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTATGTGAG
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCTTTCTTG (
3
)
1.2
0.0012
3T3 fibroblasts
CAGTTGTAAA
(
2
)
3.5
0.0035
E15 cortex
CAGTTGTAAA
(
2
)
4.9
0.0049
P1 cortex
AAAAGTTGTA
(
9
)
4.5
0.0045
P1 cortex
CAGTTGTAAA
(
2
)
4.5
0.0045
P1 cortex
TATCACGATT
(
2
)
4.5
0.0045
Hypothalamus
CAGTTGTAAA
(
2
)
14.5
0.0145
Hypothalamus
AAAAGTTGTA
(
9
)
7.2
0.0072
Hypothalamus
TGGGTGATGG (
7
)
5.4
0.0054
Hypothalamus
GCAGTTCCCA (
3
)
1.8
0.0018
Hypothalamus
TGTATGTGAG
(
5
)
1.8
0.0018
E12.5 retina
CAGTTGTAAA
(
2
)
18.8
0.0188
E12.5 retina
AAAAGTTGTA
(
9
)
3.8
0.0038
E12.5 retina
AAGTTTCAAG
(
4
)
1.9
0.0019
E12.5 retina
TGTATGTGAG
(
5
)
1.9
0.0019
E14.5 retina
CAGTTGTAAA
(
2
)
21.9
0.0219
E14.5 retina
AAAAGTTGTA
(
9
)
3.6
0.0036
E16.5 retina
CAGTTGTAAA
(
2
)
21.7
0.0217
E16.5 retina
AAGTTTCAAG
(
4
)
5.4
0.0054
E16.5 retina
AAAAGTTGTA
(
9
)
1.8
0.0018
E16.5 retina
TATCACGATT
(
2
)
1.8
0.0018
E16.5 retina
TGTATGTGAG
(
5
)
1.8
0.0018
E18.5 retina
CAGTTGTAAA
(
2
)
30.9
0.0309
E18.5 retina
AAAAGTTGTA
(
9
)
10.9
0.0109
E18.5 retina
TATCACGATT
(
2
)
1.8
0.0018
E18.5 retina
TGGGTGATGG (
7
)
1.8
0.0018
P0.5 retina
CAGTTGTAAA
(
2
)
13.7
0.0137
P0.5 retina
TGTATGTGAG
(
5
)
2
0.002
P2.5 retina
CAGTTGTAAA
(
2
)
28.2
0.0282
P2.5 retina
AAAAGTTGTA
(
9
)
1.8
0.0018
P2.5 retina
TATCACGATT
(
2
)
1.8
0.0018
P2.5 retina
TGGGTGATGG (
7
)
1.8
0.0018
P4.5 retina
CAGTTGTAAA
(
2
)
17.8
0.0178
P4.5 retina
AAGTTTCAAG
(
4
)
2
0.002
P4.5 retina
TATCACGATT
(
2
)
2
0.002
P4.5 retina
TGGGTGATGG (
7
)
2
0.002
P6.5 retina
CAGTTGTAAA
(
2
)
21.7
0.0217
P6.5 retina
AAAAGTTGTA
(
9
)
6.7
0.0067
P6.5 retina
TGTATGTGAG
(
5
)
1.7
0.0017
P10.5 crx- retina
AAGTTTCAAG
(
4
)
3.7
0.0037
P10.5 crx- retina
TGGGTGATGG (
7
)
1.9
0.0019
P10.5 crx- retina
TTCTTTCTTG (
3
)
1.9
0.0019
P10.5 crx+ retina
CAGTTGTAAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GCAGTTCCCA (
3
)
1.9
0.0019
P10.5 crx+ retina
TTCTTTCTTG (
3
)
1.9
0.0019
Adult retinal
CAGTTGTAAA
(
2
)
3.7
0.0037
Adult retinal
AAAAGTTGTA
(
9
)
1.9
0.0019
Adult retinal
GCAGTTCCCA (
3
)
1.9
0.0019
Adult retinal
TGGGTGATGG (
7
)
1.9
0.0019
ONL
AAAAGTTGTA
(
9
)
5.7
0.0057
ONL
CAGTTGTAAA
(
2
)
5.7
0.0057
