Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.19172
Tbc1d13
TBC1 domain family, member 13
2
70296
Gene Ontology
protein binding
Human Homolog
TBC1D13[TBC1 domain family, member 13]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
GTCCAGGAAA
(
4
)
3.3
0.0033
P8 Cb GC
GAGACTTTGT
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
GAGACTTTGT
1.1
0.0011
P8 GC+1d culture
GTCCAGGAAA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
GTCCAGGAAA
(
4
)
17.6
0.0176
P8 GC+SHH+1d culture
GAGACTTTGT
3.5
0.0035
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GTCCAGGAAA
(
4
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
GAGACTTTGT
9.9
0.0099
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
P1 cortex
GAGACTTTGT
4.5
0.0045
P1 cortex
GTCCCAGGAA
(
2
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
GTCCAGGAAA
(
4
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GTCCAGGAAA
(
4
)
92
0.092
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E14.5 retina
GTCCAGGAAA
(
4
)
195
0.195
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
GTCCCAGGAA
(
2
)
1.8
0.0018
E16.5 retina
GTCCAGGAAA
(
4
)
163
0.163
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GTCCAGGAAA
(
4
)
296.5
0.2965
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
GAGACTTTGT
1.8
0.0018
E18.5 retina
GTCCCAGGAA
(
2
)
1.8
0.0018
P0.5 retina
GTCCAGGAAA
(
4
)
149.2
0.1492
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GAGACTTTGT
2
0.002
P0.5 retina
GTCCCAGGAA
(
2
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GTCCAGGAAA
(
4
)
188.3
0.1883
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GTCCAGGAAA
(
4
)
59.4
0.0594
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
GTCCAGGAAA
(
4
)
8.3
0.0083
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
GAGACTTTGT
3.7
0.0037
P10.5 crx- retina
GTCCAGGAAA
(
4
)
3.7
0.0037
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
GAGACTTTGT
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
GAGACTTTGT
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
ONL
GTCCAGGAAA
(
4
)
7.7
0.0077
ONL
GAGACTTTGT
1.9
0.0019
