Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.192580	Rtn4	reticulon 4	11		68585
Gene Ontology	angiogenesis | cell body | cell projection | endoplasmic reticulum | integral to membrane | neurogenesis | protein binding | regulation of cell migration
Human Homolog	RTN4[reticulon 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAGGAAGG (5) 3.3 0.0033 P8 Cb GC AATGAAAAGG (8) 1.6 0.0016 P8 Cb GC GGAAGGATAG 1.6 0.0016 P8 Cb GC GTGGAGGTGA (4) 1.6 0.0016 Cb medulloblastoma GCCAAAATCC (5) 11.6 0.0116 Cb medulloblastoma GGAAGGATAG 4.6 0.0046 Cb medulloblastoma TGAACAGCAC 4.6 0.0046 Cb medulloblastoma AGACTGTATT (5) 2.3 0.0023 P8 GC+1d culture GCCAAAATCC (5) 5.7 0.0057 P8 GC+1d culture AGACTGTATT (5) 2.3 0.0023 P8 GC+1d culture GAAGACATAG 1.1 0.0011 P8 GC+SHH+1d culture GCCAAAATCC (5) 4.7 0.0047 P8 GC+SHH+1d culture GGAAGGAAGG (5) 2.3 0.0023 P8 GC+SHH+1d culture TGATTTAATT (2) 2.3 0.0023 P8 GC+SHH+1d culture AGACTGTATT (5) 1.2 0.0012 P8 GC+SHH+1d culture GCATCCTTAA 1.2 0.0012 3T3 fibroblasts GCCAAAATCC (5) 21 0.021 3T3 fibroblasts GGAAGGAAGG (5) 7 0.007 3T3 fibroblasts GTGGAGGTGA (4) 7 0.007 3T3 fibroblasts GCATCCTTAA 3.5 0.0035 E15 cortex GGAAGGAAGG (5) 9.9 0.0099 E15 cortex GGAAGGATAG 9.9 0.0099 P1 cortex GGAAGGATAG 13.6 0.0136 P1 cortex GCCAAAATCC (5) 9.1 0.0091 Hypothalamus GCCAAAATCC (5) 5.4 0.0054 Hypothalamus AGACTGTATT (5) 1.8 0.0018 Hypothalamus TGAACAGCAC 1.8 0.0018 E12.5 retina GGAAGGAAGG (5) 5.6 0.0056 E12.5 retina AATGAAAAGG (8) 1.9 0.0019 E12.5 retina GTGGAGGTGA (4) 1.9 0.0019 E14.5 retina AATTTATTTT (9) 1.8 0.0018 E14.5 retina GAAGACATAG 1.8 0.0018 E14.5 retina GCCAAAATCC (5) 1.8 0.0018 E16.5 retina GCATCCTTAA 1.8 0.0018 E16.5 retina GCCAAAATCC (5) 1.8 0.0018 E16.5 retina GTGGAGGTGA (4) 1.8 0.0018 E18.5 retina GCCAAAATCC (5) 3.6 0.0036 E18.5 retina AATTTATTTT (9) 1.8 0.0018 E18.5 retina AGACTGTATT (5) 1.8 0.0018 P0.5 retina GCCAAAATCC (5) 5.9 0.0059 P0.5 retina TGAACAGCAC 2 0.002 P2.5 retina AATGAAAAGG (8) 3.5 0.0035 P2.5 retina GCCAAAATCC (5) 3.5 0.0035 P2.5 retina GTGGAGGTGA (4) 1.8 0.0018 P2.5 retina TGAACAGCAC 1.8 0.0018 P4.5 retina GGAAGGAAGG (5) 7.9 0.0079 P4.5 retina AGACTGTATT (5) 2 0.002 P4.5 retina GCCAAAATCC (5) 2 0.002 P6.5 retina GCCAAAATCC (5) 10 0.01 P6.5 retina GAAGACATAG 3.3 0.0033 P6.5 retina AATGAAAAGG (8) 1.7 0.0017 P6.5 retina TGATTTAATT (2) 1.7 0.0017 P10.5 crx- retina AGACTGTATT (5) 3.7 0.0037 P10.5 crx- retina TGAACAGCAC 3.7 0.0037 P10.5 crx- retina AATTTATTTT (9) 1.9 0.0019 P10.5 crx- retina GCATCCTTAA 1.9 0.0019 P10.5 crx- retina GCCAAAATCC (5) 1.9 0.0019 P10.5 crx+ retina GAAGACATAG 1.9 0.0019 P10.5 crx+ retina GCCAAAATCC (5) 1.9 0.0019 Adult retinal GCCAAAATCC (5) 20.4 0.0204 Adult retinal AGACTGTATT (5) 1.9 0.0019 Adult retinal GCATCCTTAA 1.9 0.0019 ONL GCCAAAATCC (5) 7.7 0.0077 ONL AGACTGTATT (5) 3.8 0.0038 ONL GCATCCTTAA 1.9 0.0019