Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.193395
6330580J24Rik
RIKEN cDNA 6330580J24 gene
9
67789
Gene Ontology
tRNA ligase activity
Human Homolog
FLJ10496[hypothetical protein FLJ10496]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGAGCTGCA
(
4
)
11.4
0.0114
P8 Cb GC
GATTTCAGCT
(
2
)
8.2
0.0082
P8 Cb GC
GACTGCTGGC
(
8
)
3.3
0.0033
Cb medulloblastoma
CTGAGCTGCA
(
4
)
4.6
0.0046
Cb medulloblastoma
GATTTCAGCT
(
2
)
2.3
0.0023
P8 GC+1d culture
CTGAGCTGCA
(
4
)
24
0.024
P8 GC+1d culture
GACTGCTGGC
(
8
)
8
0.008
P8 GC+1d culture
GATTTCAGCT
(
2
)
2.3
0.0023
P8 GC+1d culture
TGGGCAAGGC (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CTGAGCTGCA
(
4
)
16.4
0.0164
P8 GC+SHH+1d culture
GACTGCTGGC
(
8
)
11.7
0.0117
P8 GC+SHH+1d culture
GATTTCAGCT
(
2
)
2.3
0.0023
3T3 fibroblasts
CTGAGCTGCA
(
4
)
10.5
0.0105
E15 cortex
CTGAGCTGCA
(
4
)
9.9
0.0099
E15 cortex
GATTTCAGCT
(
2
)
4.9
0.0049
E15 cortex
TGGGCAAGGC (
3
)
4.9
0.0049
P1 cortex
CTGAGCTGCA
(
4
)
9.1
0.0091
P1 cortex
GATTTCAGCT
(
2
)
4.5
0.0045
Hypothalamus
CTGAGCTGCA
(
4
)
5.4
0.0054
Hypothalamus
GATTTCAGCT
(
2
)
5.4
0.0054
Hypothalamus
GACTGCTGGC
(
8
)
1.8
0.0018
E12.5 retina
CTGAGCTGCA
(
4
)
16.9
0.0169
E12.5 retina
GATTTCAGCT
(
2
)
1.9
0.0019
E14.5 retina
CTGAGCTGCA
(
4
)
18.2
0.0182
E14.5 retina
GATTTCAGCT
(
2
)
3.6
0.0036
E16.5 retina
CTGAGCTGCA
(
4
)
21.7
0.0217
E16.5 retina
GATTTCAGCT
(
2
)
1.8
0.0018
E18.5 retina
CTGAGCTGCA
(
4
)
21.8
0.0218
E18.5 retina
GATTTCAGCT
(
2
)
1.8
0.0018
P0.5 retina
CTGAGCTGCA
(
4
)
17.7
0.0177
P0.5 retina
GATTTCAGCT
(
2
)
11.8
0.0118
P0.5 retina
GACTGCTGGC
(
8
)
2
0.002
P0.5 retina
TGGGCAAGGC (
3
)
2
0.002
P0.5 retina
TTGAGCTGCA
(
2
)
2
0.002
P2.5 retina
CTGAGCTGCA
(
4
)
26.4
0.0264
P2.5 retina
GATTTCAGCT
(
2
)
1.8
0.0018
P4.5 retina
CTGAGCTGCA
(
4
)
33.7
0.0337
P4.5 retina
GATTTCAGCT
(
2
)
2
0.002
P6.5 retina
CTGAGCTGCA
(
4
)
26.7
0.0267
P6.5 retina
GATTTCAGCT
(
2
)
8.3
0.0083
P10.5 crx- retina
CTGAGCTGCA
(
4
)
33.4
0.0334
P10.5 crx- retina
GATTTCAGCT
(
2
)
7.4
0.0074
P10.5 crx+ retina
CTGAGCTGCA
(
4
)
32.7
0.0327
P10.5 crx+ retina
TTGAGCTGCA
(
2
)
3.8
0.0038
P10.5 crx+ retina
GACTGCTGGC
(
8
)
1.9
0.0019
P10.5 crx+ retina
GATTTCAGCT
(
2
)
1.9
0.0019
Adult retinal
CTGAGCTGCA
(
4
)
25.9
0.0259
Adult retinal
GATTTCAGCT
(
2
)
9.3
0.0093
Adult retinal
GACTGCTGGC
(
8
)
5.6
0.0056
ONL
GATTTCAGCT
(
2
)
5.7
0.0057
ONL
CTGAGCTGCA
(
4
)
1.9
0.0019
