Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.193688	5830469G19Rik	RIKEN cDNA 5830469G19 gene	4		76093
Mm.193688	Ptp4a2	protein tyrosine phosphatase 4a2	4		19244
Gene Ontology	phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein tyrosine/serine/threonine phosphatase activity | protein-tyrosine-phosphatase activity
Human Homolog	PTP4A2[protein tyrosine phosphatase type IVA, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 173 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC TGTGCAGATG (6) 8.2 0.0082 P8 Cb GC CACAGAACCA (4) 6.5 0.0065 P8 Cb GC CGTTTTCTGA (3) 6.5 0.0065 P8 Cb GC CAGGTGTCCA (2) 4.9 0.0049 P8 Cb GC TTCTCATAAG (4) 3.3 0.0033 P8 Cb GC AGACGGAAAA (4) 1.6 0.0016 P8 Cb GC CATTGTGGTG (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma AGACGGAAAA (4) 4.6 0.0046 Cb medulloblastoma CACAGAACCA (4) 4.6 0.0046 Cb medulloblastoma TAAAATATGT (4) 2.3 0.0023 Cb medulloblastoma TCAGTGGAAA (5) 2.3 0.0023 Cb medulloblastoma TGTGCAGATG (6) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture TGTGCAGATG (6) 10.3 0.0103 P8 GC+1d culture CAGGTGTCCA (2) 9.1 0.0091 P8 GC+1d culture CACAGAACCA (4) 4.6 0.0046 P8 GC+1d culture AGACGGAAAA (4) 3.4 0.0034 P8 GC+1d culture TTCTCATAAG (4) 3.4 0.0034 P8 GC+1d culture CGTTTTCTGA (3) 2.3 0.0023 P8 GC+1d culture GAAAAAGTGG (7) 1.1 0.0011 P8 GC+1d culture TCAGTGGAAA (5) 1.1 0.0011 P8 GC+1d culture TTTCAGTAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CACAGAACCA (4) 12.9 0.0129 P8 GC+SHH+1d culture TGTGCAGATG (6) 4.7 0.0047 P8 GC+SHH+1d culture CAGGTGTCCA (2) 3.5 0.0035 P8 GC+SHH+1d culture AGACGGAAAA (4) 2.3 0.0023 P8 GC+SHH+1d culture GAAAAAGTGG (7) 2.3 0.0023 P8 GC+SHH+1d culture TTCTCATAAG (4) 2.3 0.0023 P8 GC+SHH+1d culture CGTTTTCTGA (3) 1.2 0.0012 P8 GC+SHH+1d culture TCAGTGGAAA (5) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CACAGAACCA (4) 21 0.021 3T3 fibroblasts CAGGTGTCCA (2) 17.5 0.0175 3T3 fibroblasts CGTTTTCTGA (3) 7 0.007 3T3 fibroblasts GAAAAAGTGG (7) 3.5 0.0035 3T3 fibroblasts TGTGCAGATG (6) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex CGTTTTCTGA (3) 9.9 0.0099 E15 cortex CACAGAACCA (4) 4.9 0.0049 E15 cortex CAGGTGTCCA (2) 4.9 0.0049 E15 cortex TTCTCATAAG (4) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex CACAGAACCA (4) 9.1 0.0091 P1 cortex GAAAAAGTGG (7) 9.1 0.0091 P1 cortex TGTGCAGATG (6) 9.1 0.0091 P1 cortex AGACGGAAAA (4) 4.5 0.0045 P1 cortex CAGGTGTCCA (2) 4.5 0.0045 P1 cortex CGTTTTCTGA (3) 4.5 0.0045 P1 cortex TTCTCATAAG (4) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus TGTGCAGATG (6) 7.2 0.0072 Hypothalamus CGTTTTCTGA (3) 3.6 0.0036 Hypothalamus AGACGGAAAA (4) 1.8 0.0018 Hypothalamus CACAGAACCA (4) 1.8 0.0018 Hypothalamus CAGGTGTCCA (2) 1.8 0.0018 Hypothalamus GAAAAAGTGG (7) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CACAGAACCA (4) 26.3 0.0263 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina TGTGCAGATG (6) 11.3 0.0113 E12.5 retina CAGGTGTCCA (2) 5.6 0.0056 E12.5 retina CGTTTTCTGA (3) 3.8 0.0038 E12.5 retina TTCTCATAAG (4) 3.8 0.0038 E12.5 retina TCAGTGGAAA (5) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TGTGCAGATG (6) 18.2 0.0182 E14.5 retina GAAAAAGTGG (7) 12.8 0.0128 E14.5 retina CACAGAACCA (4) 10.9 0.0109 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina CGTTTTCTGA (3) 5.5 0.0055 E14.5 retina CTCCGAAGTA (2) 1.8 0.0018 E14.5 retina TAAAATATGT (4) 1.8 0.0018 E14.5 retina TCAGTGGAAA (5) 1.8 0.0018 E14.5 retina TTCTCATAAG (4) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TGTGCAGATG (6) 27.2 0.0272 E16.5 retina CACAGAACCA (4) 16.3 0.0163 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina CAGGTGTCCA (2) 3.6 0.0036 E16.5 retina CGTTTTCTGA (3) 3.6 0.0036 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina GAAAAAGTGG (7) 1.8 0.0018 E16.5 retina TAAAATATGT (4) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina TGTGCAGATG (6) 16.4 0.0164 E18.5 retina CACAGAACCA (4) 5.5 0.0055 E18.5 retina GAAAAAGTGG (7) 3.6 0.0036 E18.5 retina CAGGTGTCCA (2) 1.8 0.0018 E18.5 retina CGTTTTCTGA (3) 1.8 0.0018 E18.5 retina TCAGTGGAAA (5) 1.8 0.0018 E18.5 retina TTTCAGTAAA (4) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CACAGAACCA (4) 7.9 0.0079 P0.5 retina CAGGTGTCCA (2) 3.9 0.0039 P0.5 retina CTCCGAAGTA (2) 3.9 0.0039 P0.5 retina TGTGCAGATG (6) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina CGTTTTCTGA (3) 2 0.002 P0.5 retina TAAAATATGT (4) 2 0.002 P0.5 retina TTCTCATAAG (4) 2 0.002 P0.5 retina TTTCAGTAAA (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CACAGAACCA (4) 15.8 0.0158 P2.5 retina TGTGCAGATG (6) 5.3 0.0053 P2.5 retina CAGGTGTCCA (2) 3.5 0.0035 P2.5 retina GAAAAAGTGG (7) 3.5 0.0035 P2.5 retina CATTGTGGTG (2) 1.8 0.0018 P2.5 retina CGTTTTCTGA (3) 1.8 0.0018 P2.5 retina TAAAATATGT (4) 1.8 0.0018 P2.5 retina TCAGTGGAAA (5) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina CACAGAACCA (4) 11.9 0.0119 P4.5 retina TGTGCAGATG (6) 11.9 0.0119 P4.5 retina CGTTTTCTGA (3) 4 0.004 P4.5 retina AGACGGAAAA (4) 2 0.002 P4.5 retina CATTGTGGTG (2) 2 0.002 P4.5 retina GAAAAAGTGG (7) 2 0.002 P4.5 retina TCAGTGGAAA (5) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina CACAGAACCA (4) 11.7 0.0117 P6.5 retina CAGGTGTCCA (2) 8.3 0.0083 P6.5 retina AGACGGAAAA (4) 5 0.005 P6.5 retina GAAAAAGTGG (7) 5 0.005 P6.5 retina TCAGTGGAAA (5) 5 0.005 P6.5 retina TGTGCAGATG (6) 3.3 0.0033 P6.5 retina TTCTCATAAG (4) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina AGACGGAAAA (4) 5.6 0.0056 P10.5 crx- retina CACAGAACCA (4) 1.9 0.0019 P10.5 crx- retina CAGGTGTCCA (2) 1.9 0.0019 P10.5 crx- retina GAAAAAGTGG (7) 1.9 0.0019 P10.5 crx- retina TCAGTGGAAA (5) 1.9 0.0019 P10.5 crx- retina TGTGCAGATG (6) 1.9 0.0019 P10.5 crx- retina TTTCAGTAAA (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina CACAGAACCA (4) 15.4 0.0154 P10.5 crx+ retina TGTGCAGATG (6) 13.5 0.0135 P10.5 crx+ retina AGACGGAAAA (4) 7.7 0.0077 P10.5 crx+ retina CAGGTGTCCA (2) 5.8 0.0058 P10.5 crx+ retina CGTTTTCTGA (3) 1.9 0.0019 P10.5 crx+ retina GAAAAAGTGG (7) 1.9 0.0019 P10.5 crx+ retina TCAGTGGAAA (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal CACAGAACCA (4) 11.1 0.0111 Adult retinal TGTGCAGATG (6) 9.3 0.0093 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal CAGGTGTCCA (2) 1.9 0.0019 Adult retinal CGTTTTCTGA (3) 1.9 0.0019 Adult retinal TCAGTGGAAA (5) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL CACAGAACCA (4) 15.3 0.0153 ONL CAGGTGTCCA (2) 5.7 0.0057 ONL TGTGCAGATG (6) 5.7 0.0057 ONL GAAAAAGTGG (7) 1.9 0.0019