Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.195632
Git2
G protein-coupled receptor kinase-interactor 2
5
26431
Mm.195632
6430510B20Rik
RIKEN cDNA 6430510B20 gene
5
320025
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TCTGTCCTTT (
4
)
3.3
0.0033
P8 Cb GC
CCTAAAGCTA
(
3
)
1.6
0.0016
P8 Cb GC
GAATGCAGCC
(
2
)
1.6
0.0016
P8 Cb GC
TTAAGTGTTG
(
3
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TTAAGTGTTG
(
3
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
GAATGCAGCC
(
2
)
3.4
0.0034
P8 GC+1d culture
TTAAGTGTTG
(
3
)
3.4
0.0034
P8 GC+1d culture
CCTAAAGCTA
(
3
)
2.3
0.0023
P8 GC+1d culture
TCTGTCCTTT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TTAAGTGTTG
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
GAATGCAGCC
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
CCTAAAGCTA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TCTGTCCTTT (
4
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GAATGCAGCC
(
2
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TCTGTCCTTT (
4
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TCTGTCCTTT (
4
)
1.8
0.0018
Hypothalamus
TTAAGTGTTG
(
3
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TTAAGTGTTG
(
3
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TTAAGTGTTG
(
3
)
3.6
0.0036
E14.5 retina
CCTAAAGCTA
(
3
)
1.8
0.0018
E14.5 retina
GATGTGTACG
(
4
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TTAAGTGTTG
(
3
)
3.6
0.0036
E16.5 retina
GAATGCAGCC
(
2
)
1.8
0.0018
E16.5 retina
GATGTGTACG
(
4
)
1.8
0.0018
E16.5 retina
TCTGTCCTTT (
4
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
CCTAAAGCTA
(
3
)
2
0.002
P0.5 retina
GAATGCAGCC
(
2
)
2
0.002
P0.5 retina
GATGTGTACG
(
4
)
2
0.002
P0.5 retina
TTAAGTGTTG
(
3
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TTAAGTGTTG
(
3
)
7
0.007
P2.5 retina
CCTAAAGCTA
(
3
)
5.3
0.0053
P2.5 retina
GATGTGTACG
(
4
)
3.5
0.0035
P2.5 retina
TCTGTCCTTT (
4
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GATGTGTACG
(
4
)
15.9
0.0159
P4.5 retina
TTAAGTGTTG
(
3
)
9.9
0.0099
P4.5 retina
CCTAAAGCTA
(
3
)
4
0.004
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GATGTGTACG
(
4
)
20
0.02
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GATGTGTACG
(
4
)
14.9
0.0149
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GATGTGTACG
(
4
)
38.4
0.0384
P10.5 crx+ retina
CCTAAAGCTA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TTAAGTGTTG
(
3
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
GATGTGTACG
(
4
)
27.8
0.0278
Adult retinal
TCTGTCCTTT (
4
)
1.9
0.0019
Adult retinal
TTAAGTGTTG
(
3
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GATGTGTACG
(
4
)
34.5
0.0345
ONL
TTAAGTGTTG
(
3
)
3.8
0.0038
