Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.195877	Zfp106	zinc finger protein 106	2	2 67.2 cM	20402
Mm.195877	Capn3	calpain 3	2	2 67.2 cM	12335
Gene Ontology	calcium ion binding | calpain activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | intracellular | proteolysis and peptidolysis
Human Homolog	CAPN3[calpain 3, (p94)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCAGACTG (3) 1.6 0.0016 P8 Cb GC GGCCGTTCAC (2) 1.6 0.0016 Cb medulloblastoma GCCCAGACTG (3) 2.3 0.0023 Cb medulloblastoma GGCCGTTCAC (2) 2.3 0.0023 Cb medulloblastoma TATCTTGAAA (2) 2.3 0.0023 P8 GC+1d culture GCCCAGACTG (3) 4.6 0.0046 P8 GC+1d culture GGCCGTTCAC (2) 2.3 0.0023 P8 GC+SHH+1d culture GCCCAGACTG (3) 2.3 0.0023 P8 GC+SHH+1d culture TATCTTGAAA (2) 1.2 0.0012 3T3 fibroblasts GCCCAGACTG (3) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GCCCAGACTG (3) 4.5 0.0045 E12.5 retina TATCTTGAAA (2) 1.9 0.0019 E14.5 retina GCCCAGACTG (3) 1.8 0.0018 E16.5 retina TATCTTGAAA (2) 1.8 0.0018 P0.5 retina GCCCAGACTG (3) 7.9 0.0079 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina GCCCAGACTG (3) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GCCCAGACTG (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GCCCAGACTG (3) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina GCCCAGACTG (3) 1.9 0.0019 P10.5 crx+ retina GCCCAGACTG (3) 11.5 0.0115 Adult retinal GCCCAGACTG (3) 3.7 0.0037 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GCCCAGACTG (3) 3.8 0.0038