Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.196067
Ak3l
adenylate kinase 3 alpha-like
19
56248
Mm.196067
1700018L02Rik
RIKEN cDNA 1700018L02 gene
19
67329
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GATGACTTGC (
5
)
14.7
0.0147
P8 Cb GC
CTTTTTTTCT
(
9
)
1.6
0.0016
P8 Cb GC
GTGGGTTCAA
(
4
)
1.6
0.0016
P8 Cb GC
TATTATTATT (
4
)
1.6
0.0016
Cb medulloblastoma
GATGACTTGC (
5
)
30.1
0.0301
Cb medulloblastoma
CTTTTAAAAA (
10
)
2.3
0.0023
Cb medulloblastoma
CTTTTTTTCT
(
9
)
2.3
0.0023
Cb medulloblastoma
GTGGGTTCAA
(
4
)
2.3
0.0023
P8 GC+1d culture
GATGACTTGC (
5
)
11.4
0.0114
P8 GC+1d culture
CTTTTAAAAA (
10
)
4.6
0.0046
P8 GC+1d culture
GTGGGTTCAA
(
4
)
2.3
0.0023
P8 GC+1d culture
ATGCAGGGCA (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GATGACTTGC (
5
)
17.6
0.0176
P8 GC+SHH+1d culture
CTTTTAAAAA (
10
)
4.7
0.0047
P8 GC+SHH+1d culture
CTTTTTTTCT
(
9
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGGTTCAA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TATTATTATT (
4
)
1.2
0.0012
3T3 fibroblasts
ATGCAGGGCA (
6
)
3.5
0.0035
3T3 fibroblasts
GATGACTTGC (
5
)
3.5
0.0035
E15 cortex
ATGCAGGGCA (
6
)
4.9
0.0049
E15 cortex
CTTTTAAAAA (
10
)
4.9
0.0049
Hypothalamus
GATGACTTGC (
5
)
9.1
0.0091
Hypothalamus
AATGCCCACA (
8
)
3.6
0.0036
Hypothalamus
ATGCAGGGCA (
6
)
1.8
0.0018
Hypothalamus
CTTTTAAAAA (
10
)
1.8
0.0018
Hypothalamus
CTTTTTTTCT
(
9
)
1.8
0.0018
Hypothalamus
GGGGCAGCAG
(
2
)
1.8
0.0018
Hypothalamus
GTGGGTTCAA
(
4
)
1.8
0.0018
E12.5 retina
GATGACTTGC (
5
)
13.1
0.0131
E12.5 retina
CTTTTAAAAA (
10
)
3.8
0.0038
E12.5 retina
GTGGGTTCAA
(
4
)
1.9
0.0019
E12.5 retina
TATTATTATT (
4
)
1.9
0.0019
E14.5 retina
GATGACTTGC (
5
)
32.8
0.0328
E14.5 retina
CTTTTAAAAA (
10
)
7.3
0.0073
E14.5 retina
AATGCCCACA (
8
)
1.8
0.0018
E16.5 retina
GATGACTTGC (
5
)
21.7
0.0217
E16.5 retina
CTTTTAAAAA (
10
)
3.6
0.0036
E16.5 retina
CTTTTTTTCT
(
9
)
1.8
0.0018
E16.5 retina
TATTATTATT (
4
)
1.8
0.0018
E18.5 retina
GATGACTTGC (
5
)
23.6
0.0236
E18.5 retina
CTTTTAAAAA (
10
)
5.5
0.0055
P0.5 retina
GATGACTTGC (
5
)
9.8
0.0098
P0.5 retina
GTGGGTTCAA
(
4
)
5.9
0.0059
P0.5 retina
ATGCAGGGCA (
6
)
2
0.002
P2.5 retina
GATGACTTGC (
5
)
26.4
0.0264
P2.5 retina
CTTTTAAAAA (
10
)
7
0.007
P2.5 retina
GTGGGTTCAA
(
4
)
1.8
0.0018
P4.5 retina
GATGACTTGC (
5
)
11.9
0.0119
P4.5 retina
CTTTTAAAAA (
10
)
5.9
0.0059
P4.5 retina
AATGCCCACA (
8
)
2
0.002
P4.5 retina
CTTTTTTTCT
(
9
)
2
0.002
P4.5 retina
GTGGGTTCAA
(
4
)
2
0.002
P6.5 retina
GATGACTTGC (
5
)
13.3
0.0133
P6.5 retina
CTTTTAAAAA (
10
)
6.7
0.0067
P6.5 retina
GTGGGTTCAA
(
4
)
3.3
0.0033
P6.5 retina
ATGCAGGGCA (
6
)
1.7
0.0017
P6.5 retina
CTTTTTTTCT
(
9
)
1.7
0.0017
P10.5 crx- retina
GATGACTTGC (
5
)
18.6
0.0186
P10.5 crx- retina
CTTTTTTTCT
(
9
)
7.4
0.0074
P10.5 crx- retina
CTTTTAAAAA (
10
)
1.9
0.0019
P10.5 crx- retina
GGGGCAGCAG
(
2
)
1.9
0.0019
P10.5 crx- retina
TATTATTATT (
4
)
1.9
0.0019
P10.5 crx+ retina
GATGACTTGC (
5
)
15.4
0.0154
P10.5 crx+ retina
CTTTTAAAAA (
10
)
1.9
0.0019
P10.5 crx+ retina
GTGGGTTCAA
(
4
)
1.9
0.0019
Adult retinal
ATGCAGGGCA (
6
)
5.6
0.0056
Adult retinal
GATGACTTGC (
5
)
5.6
0.0056
ONL
CTTTTAAAAA (
10
)
1.9
0.0019
ONL
GGGGCAGCAG
(
2
)
1.9
0.0019
