Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196371	Ccar1	cell division cycle and apoptosis regulator 1	10		67500
Gene Ontology	molecular_function unknown | nuclear membrane lumen | positive regulation of apoptosis
Human Homolog	CCAR1[cell division cycle and apoptosis regulator 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CTTGACTTTA (3) 8.2 0.0082 P8 Cb GC GTCCTCACGG (3) 4.9 0.0049 P8 Cb GC TGAATGCAGG (2) 4.9 0.0049 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TGAATGCAGG (2) 12.6 0.0126 P8 GC+1d culture GTCCTCACGG (3) 6.8 0.0068 P8 GC+1d culture CTTGACTTTA (3) 2.3 0.0023 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture GTTCTCATCA (3) 1.1 0.0011 P8 GC+1d culture TCTTTGAGTG 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture TGAATGCAGG (2) 5.9 0.0059 P8 GC+SHH+1d culture CTTGACTTTA (3) 3.5 0.0035 P8 GC+SHH+1d culture GTCCTCACGG (3) 3.5 0.0035 P8 GC+SHH+1d culture ATTTATGATA (3) 1.2 0.0012 P8 GC+SHH+1d culture TCTTTGAGTG 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts TCTTTGAGTG 7 0.007 3T3 fibroblasts GCCATTGGAG (3) 3.5 0.0035 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 3T3 fibroblasts GTCCTCACGG (3) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex GTCCTCACGG (3) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TCTTTGAGTG 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus AATGCTCAAA (3) 1.8 0.0018 Hypothalamus GCCATTGGAG (3) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CTTGACTTTA (3) 5.6 0.0056 E12.5 retina ATTTATGATA (3) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina ATTTATGATA (3) 3.6 0.0036 E14.5 retina CTTGACTTTA (3) 3.6 0.0036 E14.5 retina GTCCTCACGG (3) 1.8 0.0018 E14.5 retina GTGATGCTTC (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CTTGACTTTA (3) 3.6 0.0036 E16.5 retina GTCCTCACGG (3) 1.8 0.0018 E16.5 retina TGGAGACAGT (2) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CTTGACTTTA (3) 3.6 0.0036 E18.5 retina GCCATTGGAG (3) 1.8 0.0018 E18.5 retina GTTCTCATCA (3) 1.8 0.0018 E18.5 retina TCTTTGAGTG 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TCTTTGAGTG 3.9 0.0039 P0.5 retina ATTTATGATA (3) 2 0.002 P0.5 retina CTTGACTTTA (3) 2 0.002 P0.5 retina GTCCTCACGG (3) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina AATGCTCAAA (3) 1.8 0.0018 P2.5 retina CTTGACTTTA (3) 1.8 0.0018 P2.5 retina TCTTTGAGTG 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina CTTGACTTTA (3) 7.9 0.0079 P4.5 retina GTCCTCACGG (3) 5.9 0.0059 P4.5 retina TCTTTGAGTG 4 0.004 P4.5 retina GTTCTCATCA (3) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CTTGACTTTA (3) 5 0.005 P6.5 retina ATTTATGATA (3) 3.3 0.0033 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina TCTTTGAGTG 1.7 0.0017 P6.5 retina TGGAGACAGT (2) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CTTGACTTTA (3) 5.6 0.0056 P10.5 crx- retina ATTTATGATA (3) 3.7 0.0037 P10.5 crx- retina GTCCTCACGG (3) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina GTCCTCACGG (3) 3.8 0.0038 P10.5 crx+ retina ATTTATGATA (3) 1.9 0.0019 P10.5 crx+ retina TGGAGACAGT (2) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal ATTTATGATA (3) 7.4 0.0074 Adult retinal TCTTTGAGTG 5.6 0.0056 Adult retinal CTTGACTTTA (3) 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal GTCCTCACGG (3) 3.7 0.0037 ONL CCTTTAATCC (355) 84.3 0.0843 ONL ATTTATGATA (3) 7.7 0.0077 ONL CTTGACTTTA (3) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL GTCCTCACGG (3) 1.9 0.0019 ONL TGAATGCAGG (2) 1.9 0.0019