Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.196480
D15Mit260
DNA Segment, Chr 15 Massachusetts Institute of Technology 260
15
15 46.6 cM
27008
Gene Ontology
cytoskeleton
Human Homolog
MICAL-L1[MICAL-like 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGTTCAAGGC (
12
)
3.3
0.0033
P8 Cb GC
TAGGCCAGGT (
3
)
1.6
0.0016
Cb medulloblastoma
TAGGCCAGGT (
3
)
2.3
0.0023
Cb medulloblastoma
TGGTCAATAA
(
4
)
2.3
0.0023
P8 GC+1d culture
TAGGCCAGGT (
3
)
3.4
0.0034
P8 GC+1d culture
TGGTCAATAA
(
4
)
3.4
0.0034
P8 GC+1d culture
ACTCTTTCCT (
6
)
1.1
0.0011
P8 GC+1d culture
AGTTCAAGGC (
12
)
1.1
0.0011
P8 GC+1d culture
TCTCCATTCC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TAGGCCAGGT (
3
)
8.2
0.0082
P8 GC+SHH+1d culture
TGGTCAATAA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGTTCAAGGC (
12
)
1.2
0.0012
P8 GC+SHH+1d culture
GCGGGGCCGC
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GGTGGGCAGG
(
3
)
1.2
0.0012
3T3 fibroblasts
GCGGGGCCGC
(
3
)
3.5
0.0035
E15 cortex
AGTTCAAGGC (
12
)
4.9
0.0049
E15 cortex
GGTGGGCAGG
(
3
)
4.9
0.0049
E15 cortex
TAGGCCAGGT (
3
)
4.9
0.0049
P1 cortex
AGTTCAAGGC (
12
)
4.5
0.0045
P1 cortex
TGGTCAATAA
(
4
)
4.5
0.0045
Hypothalamus
ACTCTTTCCT (
6
)
1.8
0.0018
Hypothalamus
GGTGGGCAGG
(
3
)
1.8
0.0018
Hypothalamus
TAGGCCAGGT (
3
)
1.8
0.0018
Hypothalamus
TCTCCATTCC
(
2
)
1.8
0.0018
E12.5 retina
TAGGCCAGGT (
3
)
9.4
0.0094
E12.5 retina
TGGTCAATAA
(
4
)
3.8
0.0038
E12.5 retina
ACTCTTTCCT (
6
)
1.9
0.0019
E12.5 retina
AGTTCAAGGC (
12
)
1.9
0.0019
E14.5 retina
TAGGCCAGGT (
3
)
5.5
0.0055
E14.5 retina
ACTCTTTCCT (
6
)
1.8
0.0018
E14.5 retina
GCGGGGCCGC
(
3
)
1.8
0.0018
E16.5 retina
ACTCTTTCCT (
6
)
3.6
0.0036
E16.5 retina
AGTTCAAGGC (
12
)
3.6
0.0036
E16.5 retina
TAGGCCAGGT (
3
)
3.6
0.0036
E18.5 retina
TAGGCCAGGT (
3
)
5.5
0.0055
E18.5 retina
AGTTCAAGGC (
12
)
1.8
0.0018
E18.5 retina
TGGTCAATAA
(
4
)
1.8
0.0018
P0.5 retina
AGTTCAAGGC (
12
)
3.9
0.0039
P0.5 retina
GGTGGGCAGG
(
3
)
2
0.002
P0.5 retina
TAGGCCAGGT (
3
)
2
0.002
P0.5 retina
TCTCCATTCC
(
2
)
2
0.002
P2.5 retina
AGTTCAAGGC (
12
)
7
0.007
P2.5 retina
TAGGCCAGGT (
3
)
1.8
0.0018
P4.5 retina
TGGTCAATAA
(
4
)
5.9
0.0059
P4.5 retina
AGTTCAAGGC (
12
)
4
0.004
P4.5 retina
TAGGCCAGGT (
3
)
2
0.002
P6.5 retina
AGTTCAAGGC (
12
)
5
0.005
P6.5 retina
TAGGCCAGGT (
3
)
1.7
0.0017
P6.5 retina
TGGTCAATAA
(
4
)
1.7
0.0017
P10.5 crx- retina
ACTCTTTCCT (
6
)
5.6
0.0056
P10.5 crx- retina
TAGGCCAGGT (
3
)
1.9
0.0019
P10.5 crx- retina
TGGTCAATAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGTGGGCAGG
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGGTCAATAA
(
4
)
1.9
0.0019
Adult retinal
GGTGGGCAGG
(
3
)
1.9
0.0019
ONL
AGTTCAAGGC (
12
)
1.9
0.0019
ONL
GGTGGGCAGG
(
3
)
1.9
0.0019