Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196484	Csrp1	cysteine and glycine-rich protein 1	1	3 1.0 cM	13007
Gene Ontology	actin cytoskeleton | actin cytoskeleton organization and biogenesis | nucleus | protein binding | zinc ion binding
Human Homolog	CSRP1[cysteine and glycine-rich protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGTCAAAGG (6) 55.5 0.0555 P8 Cb GC GGCTGTTGAA (2) 29.4 0.0294 P8 Cb GC TGCAAGACCC (6) 4.9 0.0049 Cb medulloblastoma GGCTGTTGAA (2) 92.5 0.0925 Cb medulloblastoma GGGTCAAAGG (6) 9.2 0.0092 Cb medulloblastoma GCCACCACCA (9) 4.6 0.0046 Cb medulloblastoma AGAGGCAGGG (8) 2.3 0.0023 Cb medulloblastoma CCTACAGCCC (2) 2.3 0.0023 P8 GC+1d culture GGGTCAAAGG (6) 63.9 0.0639 P8 GC+1d culture GGCTGTTGAA (2) 18.3 0.0183 P8 GC+1d culture TGCAAGACCC (6) 1.1 0.0011 P8 GC+SHH+1d culture GGGTCAAAGG (6) 58.5 0.0585 P8 GC+SHH+1d culture GGCTGTTGAA (2) 21.1 0.0211 P8 GC+SHH+1d culture TGCAAGACCC (6) 4.7 0.0047 3T3 fibroblasts GGGTCAAAGG (6) 14 0.014 3T3 fibroblasts GGCTGTTGAA (2) 7 0.007 3T3 fibroblasts TGCAAGACCC (6) 7 0.007 E15 cortex GGGTCAAAGG (6) 29.7 0.0297 P1 cortex GGGTCAAAGG (6) 22.7 0.0227 P1 cortex GCCAACACCT (5) 4.5 0.0045 P1 cortex TGCAAGACCC (6) 4.5 0.0045 Hypothalamus GGCTGTTGAA (2) 81.5 0.0815 Hypothalamus GGGTCAAAGG (6) 3.6 0.0036 Hypothalamus CCTACAGCCC (2) 1.8 0.0018 E12.5 retina GGGTCAAAGG (6) 22.5 0.0225 E12.5 retina GGCTGTTGAA (2) 18.8 0.0188 E12.5 retina CCTACAGCCC (2) 3.8 0.0038 E12.5 retina AGGAAGGGGG (9) 1.9 0.0019 E12.5 retina GCCAACACCT (5) 1.9 0.0019 E14.5 retina GGGTCAAAGG (6) 3.6 0.0036 E14.5 retina TGCAAGACCC (6) 3.6 0.0036 E16.5 retina GGGTCAAAGG (6) 30.8 0.0308 E16.5 retina GGCTGTTGAA (2) 14.5 0.0145 E16.5 retina GCCAACACCT (5) 1.8 0.0018 E16.5 retina TGCAAGACCC (6) 1.8 0.0018 E18.5 retina GGGTCAAAGG (6) 38.2 0.0382 E18.5 retina GGCTGTTGAA (2) 29.1 0.0291 E18.5 retina AGGAAGGGGG (9) 1.8 0.0018 E18.5 retina CCTACAGCCC (2) 1.8 0.0018 P0.5 retina GGGTCAAAGG (6) 51 0.051 P0.5 retina GGCTGTTGAA (2) 13.7 0.0137 P0.5 retina AGAGGCAGGG (8) 7.9 0.0079 P0.5 retina TGCAAGACCC (6) 3.9 0.0039 P2.5 retina GGGTCAAAGG (6) 40.5 0.0405 P2.5 retina GGCTGTTGAA (2) 24.6 0.0246 P2.5 retina AGGAAGGGGG (9) 3.5 0.0035 P2.5 retina TGCAAGACCC (6) 1.8 0.0018 P4.5 retina GGGTCAAAGG (6) 29.7 0.0297 P4.5 retina GGCTGTTGAA (2) 13.9 0.0139 P4.5 retina AGGAAGGGGG (9) 2 0.002 P6.5 retina GGGTCAAAGG (6) 11.7 0.0117 P6.5 retina GGCTGTTGAA (2) 8.3 0.0083 P6.5 retina GCCACCACCA (9) 3.3 0.0033 P6.5 retina TGCAAGACCC (6) 1.7 0.0017 P10.5 crx- retina GGGTCAAAGG (6) 65 0.065 P10.5 crx- retina GGCTGTTGAA (2) 3.7 0.0037 P10.5 crx- retina AGGAAGGGGG (9) 1.9 0.0019 P10.5 crx- retina TGCAAGACCC (6) 1.9 0.0019 P10.5 crx+ retina GGGTCAAAGG (6) 36.5 0.0365 P10.5 crx+ retina GGCTGTTGAA (2) 5.8 0.0058 P10.5 crx+ retina AGGAAGGGGG (9) 1.9 0.0019 Adult retinal GGGTCAAAGG (6) 24.1 0.0241 Adult retinal AGAGGCAGGG (8) 1.9 0.0019 Adult retinal TGCAAGACCC (6) 1.9 0.0019 ONL GGCTGTTGAA (2) 9.6 0.0096 ONL GGGTCAAAGG (6) 9.6 0.0096