Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.196512
2900046G09Rik
RIKEN cDNA 2900046G09 gene
16
78408
Gene Ontology
transport
|
transporter activity
Human Homolog
MGC21688[hypothetical protein MGC21688]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGTGTGGAAT (
3
)
8.2
0.0082
P8 Cb GC
TATAGAAAAA (
6
)
6.5
0.0065
P8 Cb GC
AGTGGCTAAT
(
3
)
1.6
0.0016
P8 Cb GC
CGCTCTGGGG
(
3
)
1.6
0.0016
Cb medulloblastoma
TATAGAAAAA (
6
)
11.6
0.0116
Cb medulloblastoma
AGTGGCTAAT
(
3
)
9.2
0.0092
Cb medulloblastoma
AGTGTGGAAT (
3
)
2.3
0.0023
Cb medulloblastoma
TATAGAACAC
2.3
0.0023
P8 GC+1d culture
AGTGGCTAAT
(
3
)
6.8
0.0068
P8 GC+1d culture
AGTGTGGAAT (
3
)
3.4
0.0034
P8 GC+1d culture
TATAGAAAAA (
6
)
2.3
0.0023
P8 GC+1d culture
CGCTCTGGGG
(
3
)
1.1
0.0011
P8 GC+1d culture
TATAGAACAC
1.1
0.0011
P8 GC+SHH+1d culture
TATAGAAAAA (
6
)
7
0.007
P8 GC+SHH+1d culture
AGTGTGGAAT (
3
)
5.9
0.0059
P8 GC+SHH+1d culture
AGTGGCTAAT
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
CGCTCTGGGG
(
3
)
1.2
0.0012
3T3 fibroblasts
CGCTCTGGGG
(
3
)
3.5
0.0035
E15 cortex
AGTGGCTAAT
(
3
)
4.9
0.0049
E15 cortex
TGCAGTGCGT
4.9
0.0049
P1 cortex
AGTGGCTAAT
(
3
)
4.5
0.0045
P1 cortex
CGCTCTGGGG
(
3
)
4.5
0.0045
P1 cortex
TATAGAAAAA (
6
)
4.5
0.0045
Hypothalamus
AGTGGCTAAT
(
3
)
3.6
0.0036
Hypothalamus
AGTGTGGAAT (
3
)
1.8
0.0018
Hypothalamus
TATAGAACAC
1.8
0.0018
Hypothalamus
TGCAGTGCGT
1.8
0.0018
E12.5 retina
TATAGAAAAA (
6
)
22.5
0.0225
E12.5 retina
AGTGTGGAAT (
3
)
9.4
0.0094
E12.5 retina
CGCTCTGGGG
(
3
)
1.9
0.0019
E14.5 retina
TATAGAAAAA (
6
)
9.1
0.0091
E14.5 retina
AGTGTGGAAT (
3
)
5.5
0.0055
E16.5 retina
TATAGAAAAA (
6
)
7.2
0.0072
E16.5 retina
AGTGTGGAAT (
3
)
3.6
0.0036
E18.5 retina
TATAGAAAAA (
6
)
18.2
0.0182
E18.5 retina
AGTGTGGAAT (
3
)
16.4
0.0164
E18.5 retina
AGTGGCTAAT
(
3
)
1.8
0.0018
P0.5 retina
TATAGAAAAA (
6
)
7.9
0.0079
P0.5 retina
AGTGTGGAAT (
3
)
5.9
0.0059
P0.5 retina
CGCTCTGGGG
(
3
)
5.9
0.0059
P2.5 retina
TATAGAAAAA (
6
)
7
0.007
P2.5 retina
AGTGTGGAAT (
3
)
3.5
0.0035
P4.5 retina
TATAGAAAAA (
6
)
15.9
0.0159
P4.5 retina
AGTGTGGAAT (
3
)
7.9
0.0079
P4.5 retina
AGTGGCTAAT
(
3
)
2
0.002
P4.5 retina
CGCTCTGGGG
(
3
)
2
0.002
P6.5 retina
AGTGTGGAAT (
3
)
8.3
0.0083
P6.5 retina
TATAGAAAAA (
6
)
6.7
0.0067
P10.5 crx- retina
CGCTCTGGGG
(
3
)
3.7
0.0037
P10.5 crx- retina
AGTGGCTAAT
(
3
)
1.9
0.0019
P10.5 crx- retina
AGTGTGGAAT (
3
)
1.9
0.0019
P10.5 crx- retina
TATAGAAAAA (
6
)
1.9
0.0019
P10.5 crx+ retina
AGTGTGGAAT (
3
)
7.7
0.0077
P10.5 crx+ retina
AGTGGCTAAT
(
3
)
3.8
0.0038
P10.5 crx+ retina
CGCTCTGGGG
(
3
)
1.9
0.0019
P10.5 crx+ retina
TATAGAAAAA (
6
)
1.9
0.0019
Adult retinal
AGTGTGGAAT (
3
)
3.7
0.0037
Adult retinal
CGCTCTGGGG
(
3
)
3.7
0.0037
Adult retinal
TGCAGTGCGT
1.9
0.0019
ONL
TATAGAAAAA (
6
)
9.6
0.0096
ONL
AGTGTGGAAT (
3
)
1.9
0.0019
