Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196533	Scotin	scotin gene	9		66940
Gene Ontology	apoptotic program | endoplasmic reticulum | induction of apoptosis | integral to membrane | nuclear membrane
Human Homolog	SCOTIN[scotin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TGTTCACTAA (3) 8.2 0.0082 P8 Cb GC TGGCTTCCTC (3) 1.6 0.0016 P8 Cb GC TGGTGTGTGT (8) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TGTTCACTAA (3) 9.2 0.0092 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TGTTCACTAA (3) 10.3 0.0103 P8 GC+1d culture TGTTCACTAT 3.4 0.0034 P8 GC+1d culture TGGCTTCCTC (3) 1.1 0.0011 P8 GC+1d culture TGGTGTGTGT (8) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture TGTTCACTAA (3) 8.2 0.0082 3T3 fibroblasts TGGCTTCCTC (3) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex TGTTCACTAA (3) 9.1 0.0091 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TGTTCACTAA (3) 41.7 0.0417 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina TGTTCACTAA (3) 5.6 0.0056 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina TGTTCACTAA (3) 5.5 0.0055 E14.5 retina TGGTGTGTGT (8) 3.6 0.0036 E14.5 retina AAAATTTACA (4) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TGTTCACTAA (3) 10.9 0.0109 E16.5 retina AAAATTTACA (4) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina TGTTCACTAA (3) 16.4 0.0164 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TGTTCACTAA (3) 3.9 0.0039 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina TGTTCACTAA (3) 8.8 0.0088 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina TGTTCACTAA (3) 4 0.004 P4.5 retina TGGCTTCCTC (3) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TGTTCACTAA (3) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TGTTCACTAA (3) 7.7 0.0077 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TGTTCACTAA (3) 1.9 0.0019 Adult retinal TGTTCACTAT 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249