Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.196596
3110002H16Rik
RIKEN cDNA 3110002H16 gene
18
76482
Human Homolog
C18orf8[chromosome 18 open reading frame 8]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGTCTCCTT
(
3
)
1.6
0.0016
P8 Cb GC
GGCGGGAAGG (
4
)
1.6
0.0016
P8 Cb GC
TTTTTTTATA
(
3
)
1.6
0.0016
Cb medulloblastoma
GGGTTTGGCT (
5
)
2.3
0.0023
P8 GC+1d culture
GGACCTGGCC (
7
)
3.4
0.0034
P8 GC+1d culture
CTGTCTCCTT
(
3
)
2.3
0.0023
P8 GC+1d culture
GGTTTTAACT
(
6
)
2.3
0.0023
P8 GC+1d culture
GGCGGGAAGG (
4
)
1.1
0.0011
P8 GC+1d culture
GGGTTTGGCT (
5
)
1.1
0.0011
P8 GC+1d culture
TTTTTTTATA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGTTTGGCT (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
GGTTTTAACT
(
6
)
3.5
0.0035
P8 GC+SHH+1d culture
CAAAAAAAGA (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGTCTCCTT
(
3
)
1.2
0.0012
3T3 fibroblasts
GCCACCAATG
(
3
)
3.5
0.0035
E15 cortex
CAAAAAAAGA (
7
)
9.9
0.0099
P1 cortex
GCCACCAATG
(
3
)
4.5
0.0045
P1 cortex
GGACCTGGCC (
7
)
4.5
0.0045
Hypothalamus
GGTTTTAACT
(
6
)
3.6
0.0036
Hypothalamus
GGACCTGGCC (
7
)
1.8
0.0018
E12.5 retina
GGGTTTGGCT (
5
)
3.8
0.0038
E12.5 retina
GGTTTTAACT
(
6
)
1.9
0.0019
E12.5 retina
TTGCACAGAC
1.9
0.0019
E12.5 retina
TTTTTTTATA
(
3
)
1.9
0.0019
E14.5 retina
GGTTTTAACT
(
6
)
10.9
0.0109
E14.5 retina
GGGTTTGGCT (
5
)
3.6
0.0036
E14.5 retina
CTGTCTCCTT
(
3
)
1.8
0.0018
E14.5 retina
GCCACCAATG
(
3
)
1.8
0.0018
E14.5 retina
TTGCACAGAC
1.8
0.0018
E16.5 retina
GGTTTTAACT
(
6
)
5.4
0.0054
E16.5 retina
TTTTTTTATA
(
3
)
3.6
0.0036
P0.5 retina
CTGTCTCCTT
(
3
)
2
0.002
P2.5 retina
GGTTTTAACT
(
6
)
1.8
0.0018
P2.5 retina
TTTTTTTATA
(
3
)
1.8
0.0018
P4.5 retina
GGTTTTAACT
(
6
)
4
0.004
P4.5 retina
CTGTCTCCTT
(
3
)
2
0.002
P4.5 retina
TGCTTGCTTT
(
8
)
2
0.002
P6.5 retina
GGTTTTAACT
(
6
)
3.3
0.0033
P6.5 retina
CTGTCTCCTT
(
3
)
1.7
0.0017
P6.5 retina
GGACCTGGCC (
7
)
1.7
0.0017
P6.5 retina
TTTTTTTATA
(
3
)
1.7
0.0017
P10.5 crx- retina
GGACCTGGCC (
7
)
1.9
0.0019
P10.5 crx+ retina
GGACCTGGCC (
7
)
1.9
0.0019
P10.5 crx+ retina
GGCGGGAAGG (
4
)
1.9
0.0019
P10.5 crx+ retina
GGTTTTAACT
(
6
)
1.9
0.0019
P10.5 crx+ retina
TGCTTGCTTT
(
8
)
1.9
0.0019
Adult retinal
TGCTTGCTTT
(
8
)
3.7
0.0037
Adult retinal
TTGCACAGAC
1.9
0.0019
ONL
CTGTCTCCTT
(
3
)
3.8
0.0038
ONL
GGTTTTAACT
(
6
)
1.9
0.0019
