Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.197 Hoxa1homeo box A1 6  6 26.28 cM  15394 
 Gene Ontology development | DNA binding | nucleus | organogenesis | pattern specification | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
 Human Homolog HOXA1[homeo box A1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAACAGCTCTG (7)6.50.0065
P8 Cb GCATTTTTAAAT (5)3.30.0033
P8 Cb GCTCTGTAATAA (3)3.30.0033
P8 GC+1d cultureAACAGCTCTG (7)160.016
P8 GC+1d cultureATTTTTAAAT (5)3.40.0034
P8 GC+SHH+1d cultureAACAGCTCTG (7)8.20.0082
P8 GC+SHH+1d cultureATTTTTAAAT (5)2.30.0023
P8 GC+SHH+1d cultureTCTGTAATAA (3)1.20.0012
P1 cortexAACAGCTCTG (7)4.50.0045
P1 cortexTCTGTAATAA (3)4.50.0045
HypothalamusATTTTTAAAT (5)3.60.0036
HypothalamusTCTGTAATAA (3)3.60.0036
E12.5 retinaAACAGCTCTG (7)1.90.0019
E12.5 retinaTCTGTAATAA (3)1.90.0019
E14.5 retinaAACAGCTCTG (7)5.50.0055
E14.5 retinaATTTTTAAAT (5)3.60.0036
E14.5 retinaTCTGTAATAA (3)1.80.0018
E16.5 retinaTCTGTAATAA (3)5.40.0054
E18.5 retinaTCTGTAATAA (3)5.50.0055
P0.5 retinaAACAGCTCTG (7)3.90.0039
P2.5 retinaTCTGTAATAA (3)3.50.0035
P2.5 retinaAACAGCTCTG (7)1.80.0018
P4.5 retinaTCTGTAATAA (3)9.90.0099
P6.5 retinaTCTGTAATAA (3)3.30.0033
P10.5 crx- retinaATTTTTAAAT (5)3.70.0037
P10.5 crx+ retinaAACAGCTCTG (7)1.90.0019
Adult retinalAACAGCTCTG (7)3.70.0037
Adult retinalATTTTTAAAT (5)3.70.0037
ONLTCTGTAATAA (3)3.80.0038