Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.197728
Cox7b
cytochrome c oxidase subunit VIIb
X
66142
Mm.197728
AL117946
expressed sequence AL117946
X
404572
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 83 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TACTCATTAT
(
2
)
16.3
0.0163
P8 Cb GC
TAAAGTCAAA (
3
)
4.9
0.0049
P8 Cb GC
AAACCAGAGC (
7
)
1.6
0.0016
P8 Cb GC
AATCTACATT (
4
)
1.6
0.0016
P8 Cb GC
GAAACTAGGT
(
2
)
1.6
0.0016
Cb medulloblastoma
TAAAGTCAAA (
3
)
25.4
0.0254
Cb medulloblastoma
TACTCATTAT
(
2
)
18.5
0.0185
Cb medulloblastoma
GAAACTAGGT
(
2
)
6.9
0.0069
Cb medulloblastoma
CTGTGTTCTA
(
2
)
2.3
0.0023
P8 GC+1d culture
TACTCATTAT
(
2
)
19.4
0.0194
P8 GC+1d culture
GAAACTAGGT
(
2
)
9.1
0.0091
P8 GC+1d culture
TAAAGTCAAA (
3
)
5.7
0.0057
P8 GC+1d culture
CCCCAACCCC (
7
)
4.6
0.0046
P8 GC+1d culture
AATCTACATT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TACTCATTAT
(
2
)
26.9
0.0269
P8 GC+SHH+1d culture
TAAAGTCAAA (
3
)
10.5
0.0105
P8 GC+SHH+1d culture
CCCCAACCCC (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
GAAACTAGGT
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
AATCTACATT (
4
)
2.3
0.0023
3T3 fibroblasts
GAAACTAGGT
(
2
)
21
0.021
3T3 fibroblasts
AAACCAGAGC (
7
)
3.5
0.0035
3T3 fibroblasts
CCCCAACCCC (
7
)
3.5
0.0035
3T3 fibroblasts
CGGGGCGAGC (
5
)
3.5
0.0035
3T3 fibroblasts
TACTCATTAT
(
2
)
3.5
0.0035
E15 cortex
AAACCAGAGC (
7
)
9.9
0.0099
E15 cortex
AATCTACATT (
4
)
4.9
0.0049
E15 cortex
CCCCAACCCC (
7
)
4.9
0.0049
E15 cortex
TACTCATTAT
(
2
)
4.9
0.0049
P1 cortex
TACTCATTAT
(
2
)
31.8
0.0318
P1 cortex
GAAACTAGGT
(
2
)
27.3
0.0273
P1 cortex
AAACCAGAGC (
7
)
18.2
0.0182
P1 cortex
CCCCAACCCC (
7
)
13.6
0.0136
P1 cortex
CGGGGCGAGC (
5
)
4.5
0.0045
P1 cortex
CTGTGTTCTA
(
2
)
4.5
0.0045
P1 cortex
TAAAGTCAAA (
3
)
4.5
0.0045
Hypothalamus
TACTCATTAT
(
2
)
92.4
0.0924
Hypothalamus
GAAACTAGGT
(
2
)
21.7
0.0217
Hypothalamus
TAAAGTCAAA (
3
)
10.9
0.0109
Hypothalamus
ATTCTTTGAC (
3
)
3.6
0.0036
E12.5 retina
TACTCATTAT
(
2
)
15
0.015
E12.5 retina
GAAACTAGGT
(
2
)
7.5
0.0075
E12.5 retina
CTGTGTTCTA
(
2
)
1.9
0.0019
E14.5 retina
TACTCATTAT
(
2
)
29.2
0.0292
E14.5 retina
GAAACTAGGT
(
2
)
3.6
0.0036
E14.5 retina
ATTCTTTGAC (
3
)
1.8
0.0018
E16.5 retina
TACTCATTAT
(
2
)
43.5
0.0435
E16.5 retina
GAAACTAGGT
(
2
)
10.9
0.0109
E16.5 retina
TAAAGTCAAA (
3
)
1.8
0.0018
E18.5 retina
TACTCATTAT
(
2
)
30.9
0.0309
E18.5 retina
ATTCTTTGAC (
3
)
1.8
0.0018
E18.5 retina
CCCCAACCCC (
7
)
1.8
0.0018
E18.5 retina
TAAAGTCAAA (
3
)
1.8
0.0018
P0.5 retina
TACTCATTAT
(
2
)
13.7
0.0137
P0.5 retina
CCCCAACCCC (
7
)
5.9
0.0059
P0.5 retina
AATCTACATT (
4
)
2
0.002
P0.5 retina
CTGTGTTCTA
(
2
)
2
0.002
P0.5 retina
GAAACTAGGT
(
2
)
2
0.002
P2.5 retina
TACTCATTAT
(
2
)
31.7
0.0317
P2.5 retina
TAAAGTCAAA (
3
)
5.3
0.0053
P2.5 retina
AATCTACATT (
4
)
1.8
0.0018
P4.5 retina
TACTCATTAT
(
2
)
23.8
0.0238
P4.5 retina
GAAACTAGGT
(
2
)
5.9
0.0059
P4.5 retina
CCCCAACCCC (
7
)
4
0.004
P4.5 retina
ATTCTTTGAC (
3
)
2
0.002
P4.5 retina
TCCCCTGTTG
(
3
)
2
0.002
P6.5 retina
TACTCATTAT
(
2
)
21.7
0.0217
P6.5 retina
GAAACTAGGT
(
2
)
5
0.005
P6.5 retina
TAAAGTCAAA (
3
)
5
0.005
P6.5 retina
AAACCAGAGC (
7
)
1.7
0.0017
P10.5 crx- retina
TACTCATTAT
(
2
)
39
0.039
P10.5 crx- retina
TCCCCTGTTG
(
3
)
3.7
0.0037
P10.5 crx- retina
CCCCAACCCC (
7
)
1.9
0.0019
P10.5 crx- retina
GAAACTAGGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TACTCATTAT
(
2
)
23.1
0.0231
P10.5 crx+ retina
GAAACTAGGT
(
2
)
5.8
0.0058
Adult retinal
CCCCAACCCC (
7
)
5.6
0.0056
Adult retinal
GAAACTAGGT
(
2
)
5.6
0.0056
Adult retinal
AAACCAGAGC (
7
)
1.9
0.0019
Adult retinal
CTGTGTTCTA
(
2
)
1.9
0.0019
Adult retinal
TACTCATTAT
(
2
)
1.9
0.0019
ONL
TACTCATTAT
(
2
)
23
0.023
ONL
CGGGGCGAGC (
5
)
1.9
0.0019
ONL
GAAACTAGGT
(
2
)
1.9
0.0019
