Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.1999
Attp
signaling molecule ATTP
7
54122
Mm.1999
8430408E05Rik
RIKEN cDNA 8430408E05 gene
7
71499
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
TGAAGCACGA
(
5
)
4.9
0.0049
P8 Cb GC
TTAGGCAGGT
(
2
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
TGAAGCACAA
(
4
)
1.1
0.0011
P8 GC+1d culture
TGAAGCACGA
(
5
)
1.1
0.0011
P8 GC+1d culture
TTAGGCAGGT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
TGAAGCACGA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
TAATTTAAAA (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TTAGGCAGGT
(
2
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
TGAAGCACGA
(
5
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
CTCTCCAGCA
(
2
)
1.8
0.0018
Hypothalamus
TGAAGCACGA
(
5
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
TGAAGCACGA
(
5
)
1.9
0.0019
E12.5 retina
TTAGGCAAGG (
4
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
TTAGGCAAGG (
4
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
CTCTCCAGCA
(
2
)
3.6
0.0036
E16.5 retina
TAATTTAAAA (
4
)
1.8
0.0018
E16.5 retina
TGAAGCACGA
(
5
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
TGAAGCACGA
(
5
)
3.6
0.0036
E18.5 retina
TTAGGCAGGT
(
2
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
TGAAGCACAA
(
4
)
3.9
0.0039
P0.5 retina
TGAAGCACGA
(
5
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
CTCTCCAGCA
(
2
)
3.5
0.0035
P2.5 retina
TGAAGCACAA
(
4
)
3.5
0.0035
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
TTAGGCAAGG (
4
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TGAAGCACGA
(
5
)
5
0.005
P6.5 retina
TAATTTAAAA (
4
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
TGAAGCACGA
(
5
)
7.4
0.0074
Adult retinal
TGAAGCACAA
(
4
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
TTAGGCAAGG (
4
)
3.8
0.0038
