Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19992	Ttrap	Traf and Tnf receptor associated protein	13	13 12.0 cM	56196
Gene Ontology	biological_process unknown | cellular_component unknown | endonuclease activity | phosphoric diester hydrolase activity | receptor activity
Human Homolog	TTRAP[TRAF and TNF receptor associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGATACGAAA 1.6 0.0016 P8 Cb GC TAATTGAAAA 1.6 0.0016 Cb medulloblastoma GGGGCTCTGT (3) 4.6 0.0046 Cb medulloblastoma GGATACGAAA 2.3 0.0023 Cb medulloblastoma TAATTGAAAA 2.3 0.0023 P8 GC+1d culture GGGGCTCTGT (3) 3.4 0.0034 P8 GC+1d culture CTTATGTCAG 2.3 0.0023 P8 GC+SHH+1d culture GGGGCTCTGT (3) 3.5 0.0035 P8 GC+SHH+1d culture CTTATGTCAG 1.2 0.0012 P8 GC+SHH+1d culture GGATACGAAA 1.2 0.0012 3T3 fibroblasts GGGGCTCTGT (3) 3.5 0.0035 P1 cortex GGGGCTCTGT (3) 4.5 0.0045 E12.5 retina GGGGCTCTGT (3) 5.6 0.0056 E14.5 retina GGGGCTCTGT (3) 3.6 0.0036 E14.5 retina CTTATGTCAG 1.8 0.0018 E16.5 retina GGGGCTCTGT (3) 10.9 0.0109 E18.5 retina GGGGCTCTGT (3) 3.6 0.0036 E18.5 retina TAATTGAAAA 1.8 0.0018 P0.5 retina GGGGCTCTGT (3) 5.9 0.0059 P2.5 retina GGGGCTCTGT (3) 24.6 0.0246 P4.5 retina GGGGCTCTGT (3) 43.6 0.0436 P4.5 retina CTTATGTCAG 4 0.004 P6.5 retina GGGGCTCTGT (3) 33.3 0.0333 P6.5 retina CTTATGTCAG 1.7 0.0017 P10.5 crx- retina GGGGCTCTGT (3) 9.3 0.0093 P10.5 crx+ retina GGGGCTCTGT (3) 34.6 0.0346 Adult retinal GGGGCTCTGT (3) 7.4 0.0074 ONL GGGGCTCTGT (3) 7.7 0.0077 ONL CTTATGTCAG 1.9 0.0019