Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20000	Dhx9	DEAH (Asp-Glu-Ala-His) box polypeptide 9	1	1 77.0 cM	13211
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | double-stranded RNA binding | helicase activity | intracellular | nucleic acid binding | nucleus | RNA binding | RNA helicase activity
Human Homolog	DHX9[DEAH (Asp-Glu-Ala-His) box polypeptide 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCTGTGAAT 14.7 0.0147 P8 Cb GC TGTAGTTTCA 8.2 0.0082 P8 Cb GC GAAGCTCTGG (4) 1.6 0.0016 P8 Cb GC TCTCAGTTGA (3) 1.6 0.0016 Cb medulloblastoma TCTCAGTTGA (3) 4.6 0.0046 Cb medulloblastoma TGTAGTTTCA 4.6 0.0046 Cb medulloblastoma TTCTGTGAAT 4.6 0.0046 P8 GC+1d culture TTCTGTGAAT 16 0.016 P8 GC+1d culture TGTAGTTTCA 13.7 0.0137 P8 GC+1d culture TCTCAGTTGA (3) 5.7 0.0057 P8 GC+1d culture GAAGCTCTGG (4) 1.1 0.0011 P8 GC+1d culture TAATCAGAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture TTCTGTGAAT 18.7 0.0187 P8 GC+SHH+1d culture TGTAGTTTCA 17.6 0.0176 P8 GC+SHH+1d culture TCTCAGTTGA (3) 4.7 0.0047 P8 GC+SHH+1d culture TAATCAGAAA (3) 2.3 0.0023 3T3 fibroblasts TTCTGTGAAT 7 0.007 3T3 fibroblasts TCTCAGTTGA (3) 3.5 0.0035 E15 cortex TAATCAGAAA (3) 4.9 0.0049 E15 cortex TTCTGTGAAT 4.9 0.0049 P1 cortex TGTAGTTTCA 9.1 0.0091 P1 cortex GAAGCTCTGG (4) 4.5 0.0045 P1 cortex TAATCAGAAA (3) 4.5 0.0045 Hypothalamus TCTCAGTTGA (3) 5.4 0.0054 Hypothalamus TGTAGTTTCA 1.8 0.0018 Hypothalamus TTCTGTGAAT 1.8 0.0018 E12.5 retina TGTAGTTTCA 9.4 0.0094 E12.5 retina TTCTGTGAAT 5.6 0.0056 E12.5 retina TCTCAGTTGA (3) 1.9 0.0019 E14.5 retina TGTAGTTTCA 5.5 0.0055 E14.5 retina TTCTGTGAAT 1.8 0.0018 E16.5 retina TGTAGTTTCA 7.2 0.0072 E16.5 retina TTCTGTGAAT 3.6 0.0036 E16.5 retina TCTCAGTTGA (3) 1.8 0.0018 E18.5 retina TGTAGTTTCA 12.7 0.0127 E18.5 retina TAATCAGAAA (3) 5.5 0.0055 E18.5 retina TCTCAGTTGA (3) 1.8 0.0018 P0.5 retina TGTAGTTTCA 11.8 0.0118 P0.5 retina TTCTGTGAAT 2 0.002 P2.5 retina TGTAGTTTCA 8.8 0.0088 P2.5 retina TTCTGTGAAT 5.3 0.0053 P2.5 retina TAATCAGAAA (3) 1.8 0.0018 P4.5 retina TGTAGTTTCA 7.9 0.0079 P4.5 retina TAATCAGAAA (3) 5.9 0.0059 P4.5 retina TCTCAGTTGA (3) 2 0.002 P4.5 retina TTCTGTGAAT 2 0.002 P6.5 retina TGTAGTTTCA 5 0.005 P6.5 retina TCTCAGTTGA (3) 1.7 0.0017 P10.5 crx- retina TAATCAGAAA (3) 1.9 0.0019 P10.5 crx+ retina TGTAGTTTCA 5.8 0.0058 P10.5 crx+ retina TCTCAGTTGA (3) 3.8 0.0038 P10.5 crx+ retina TAATCAGAAA (3) 1.9 0.0019 Adult retinal TGTAGTTTCA 7.4 0.0074 Adult retinal TTCTGTGAAT 1.9 0.0019 ONL TGTAGTTTCA 3.8 0.0038