Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.200362	Cybb	cytochrome b-245, beta polypeptide	X	X 2.8 cM	13058
Gene Ontology	electron transport | integral to membrane | ion channel activity | membrane | oxidoreductase activity | voltage-gated ion channel activity
Human Homolog	CYBB[cytochrome b-245, beta polypeptide (chronic granulomatous disease)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC ATAATACAAA 3.3 0.0033 P8 Cb GC GACTGAACAA (6) 3.3 0.0033 P8 Cb GC TAAGAAAGAA (3) 3.3 0.0033 P8 Cb GC TTTATGGAAT (3) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma ATAATACAAA 4.6 0.0046 Cb medulloblastoma TAAGAAAGAA (3) 2.3 0.0023 Cb medulloblastoma TTTATGGAAT (3) 2.3 0.0023 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture TTTATGGAAT (3) 3.4 0.0034 P8 GC+1d culture AAGACCTTTT (3) 1.1 0.0011 P8 GC+1d culture ATAATACAAA 1.1 0.0011 P8 GC+1d culture GAGGTGACCG 1.1 0.0011 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TTTATGGAAT (3) 8.2 0.0082 P8 GC+SHH+1d culture TAAGAAAGAA (3) 1.2 0.0012 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 P1 cortex TTTATGGAAT (3) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus TTTATGGAAT (3) 19.9 0.0199 Hypothalamus CCAGAAGAGG (8) 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina TTTATGGAAT (3) 5.6 0.0056 E12.5 retina CCAGAAGAGG (8) 3.8 0.0038 E12.5 retina GAGGTGACCG 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina TTTATGGAAT (3) 3.6 0.0036 E14.5 retina CCAGAAGAGG (8) 1.8 0.0018 E14.5 retina GACTGAACAA (6) 1.8 0.0018 E14.5 retina TTTTGCTTAT (5) 1.8 0.0018 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina ATAATACAAA 1.8 0.0018 E16.5 retina TAAGAAAGAA (3) 1.8 0.0018 E16.5 retina TTTATGGAAT (3) 1.8 0.0018 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina ATAATACAAA 1.8 0.0018 E18.5 retina GACTGAACAA (6) 1.8 0.0018 E18.5 retina TTTATGGAAT (3) 1.8 0.0018 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina AAGACCTTTT (3) 2 0.002 P0.5 retina ATAATACAAA 2 0.002 P0.5 retina CCAGAAGAGG (8) 2 0.002 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TTTATGGAAT (3) 7 0.007 P2.5 retina ATAATACAAA 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina ATAATACAAA 5.9 0.0059 P4.5 retina TTTATGGAAT (3) 2 0.002 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina AAGACCTTTT (3) 1.7 0.0017 P6.5 retina ATAATACAAA 1.7 0.0017 P6.5 retina CCAGAAGAGG (8) 1.7 0.0017 P6.5 retina GACTGAACAA (6) 1.7 0.0017 P6.5 retina TTTATGGAAT (3) 1.7 0.0017 P6.5 retina TTTTGCTTAT (5) 1.7 0.0017 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina TTTATGGAAT (3) 3.7 0.0037 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina ATAATACAAA 1.9 0.0019 P10.5 crx+ retina TTTTGCTTAT (5) 1.9 0.0019 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal CCAGAAGAGG (8) 1.9 0.0019 Adult retinal TAAGAAAGAA (3) 1.9 0.0019 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL CCAGAAGAGG (8) 3.8 0.0038 ONL GAGGTGACCG 1.9 0.0019