Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.200446
C630002B14Rik
RIKEN cDNA C630002B14 gene
10
103466
Mm.200446
Gnn
Grp94 neighboring nucleotidase
10
380646
Human Homolog
TU12B1-TY[TU12B1-TY protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGAACCTGAG (
3
)
14.7
0.0147
P8 Cb GC
ACACTTTTGT
(
3
)
1.6
0.0016
Cb medulloblastoma
TGAACCTGAG (
3
)
2.3
0.0023
P8 GC+1d culture
TGAACCTGAG (
3
)
22.8
0.0228
P8 GC+1d culture
ACACTTTTGT
(
3
)
3.4
0.0034
P8 GC+1d culture
CTGAGAGCCA (
10
)
1.1
0.0011
P8 GC+SHH+1d culture
TGAACCTGAG (
3
)
12.9
0.0129
P8 GC+SHH+1d culture
ACACTTTTGT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGAGAGCCA (
10
)
1.2
0.0012
3T3 fibroblasts
ACACTTTTGT
(
3
)
3.5
0.0035
3T3 fibroblasts
CTGAGAGCCA (
10
)
3.5
0.0035
E15 cortex
TGAACCTGAG (
3
)
14.8
0.0148
E15 cortex
CTGAGAGCCA (
10
)
4.9
0.0049
P1 cortex
TGAACCTGAG (
3
)
27.3
0.0273
P1 cortex
ACACTTTTGT
(
3
)
4.5
0.0045
P1 cortex
CTGAGAGCCA (
10
)
4.5
0.0045
Hypothalamus
TGAACCTGAG (
3
)
3.6
0.0036
Hypothalamus
ACACTTTTGT
(
3
)
1.8
0.0018
E12.5 retina
TGAACCTGAG (
3
)
15
0.015
E14.5 retina
TGAACCTGAG (
3
)
5.5
0.0055
E16.5 retina
CTGAGAGCCA (
10
)
1.8
0.0018
E16.5 retina
TGAACCTGAG (
3
)
1.8
0.0018
E18.5 retina
TGAACCTGAG (
3
)
3.6
0.0036
P0.5 retina
TGAACCTGAG (
3
)
5.9
0.0059
P0.5 retina
CTGAGAGCCA (
10
)
3.9
0.0039
P0.5 retina
ACACTTTTGT
(
3
)
2
0.002
P2.5 retina
TGAACCTGAG (
3
)
7
0.007
P2.5 retina
CTGAGAGCCA (
10
)
5.3
0.0053
P4.5 retina
TGAACCTGAG (
3
)
7.9
0.0079
P6.5 retina
TGAACCTGAG (
3
)
5
0.005
P6.5 retina
ACACTTTTGT
(
3
)
3.3
0.0033
P6.5 retina
CTGAGAGCCA (
10
)
3.3
0.0033
P10.5 crx- retina
TGAACCTGAG (
3
)
5.6
0.0056
P10.5 crx- retina
ACACTTTTGT
(
3
)
3.7
0.0037
P10.5 crx- retina
CTGAGAGCCA (
10
)
1.9
0.0019
P10.5 crx+ retina
CTGAGAGCCA (
10
)
1.9
0.0019
P10.5 crx+ retina
TGAACCTGAG (
3
)
1.9
0.0019
Adult retinal
CTGAGAGCCA (
10
)
1.9
0.0019
Adult retinal
TGAACCTGAG (
3
)
1.9
0.0019
ONL
TGAACCTGAG (
3
)
1.9
0.0019
