Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.200714	Bbs4	Bardet-Biedl syndrome 4 homolog (human)	9	9 33.0 cM	102774
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	BBS4[Bardet-Biedl syndrome 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CTCTTGGCTG (2) 2.3 0.0023 P8 GC+1d culture CTCTTGGCTG (2) 13.7 0.0137 P8 GC+1d culture AAGCCCAAAG (7) 1.1 0.0011 P8 GC+SHH+1d culture CTCTTGGCTG (2) 14.1 0.0141 P8 GC+SHH+1d culture AAGCCCAAAG (7) 1.2 0.0012 P8 GC+SHH+1d culture TCAGTTTAAG 1.2 0.0012 3T3 fibroblasts CTCTTGGCTG (2) 21 0.021 3T3 fibroblasts AAGCCCAAAG (7) 3.5 0.0035 E15 cortex CTCTTGGCTG (2) 24.7 0.0247 E15 cortex AAGCCCAAAG (7) 4.9 0.0049 P1 cortex CTCTTGGCTG (2) 4.5 0.0045 Hypothalamus CTCTTGGCTG (2) 1.8 0.0018 E14.5 retina AAGCCCAAAG (7) 3.6 0.0036 E14.5 retina CTCTTGGCTG (2) 3.6 0.0036 E14.5 retina AGCGTCTGCA (15) 1.8 0.0018 E16.5 retina CTCTTGGCTG (2) 9.1 0.0091 E16.5 retina TCAGTTTAAG 1.8 0.0018 E18.5 retina CTCTTGGCTG (2) 5.5 0.0055 E18.5 retina AAGCCCAAAG (7) 3.6 0.0036 P0.5 retina CTCTTGGCTG (2) 5.9 0.0059 P0.5 retina AAGCCCAAAG (7) 3.9 0.0039 P0.5 retina TGCTGAAAAT (3) 2 0.002 P2.5 retina CTCTTGGCTG (2) 5.3 0.0053 P2.5 retina AAGCCCAAAG (7) 1.8 0.0018 P2.5 retina TCAGTTTAAG 1.8 0.0018 P4.5 retina AAGCCCAAAG (7) 4 0.004 P4.5 retina TGCTGAAAAT (3) 2 0.002 P6.5 retina AAGCCCAAAG (7) 6.7 0.0067 P6.5 retina AGCGTCTGCA (15) 1.7 0.0017 P6.5 retina CTCTTGGCTG (2) 1.7 0.0017 P6.5 retina TCAGTTTAAG 1.7 0.0017 P10.5 crx- retina TGCTGAAAAT (3) 3.7 0.0037 P10.5 crx- retina TCAGTTTAAG 1.9 0.0019 P10.5 crx+ retina AGCGTCTGCA (15) 13.5 0.0135 P10.5 crx+ retina AAGCCCAAAG (7) 3.8 0.0038 P10.5 crx+ retina CTCTTGGCTG (2) 3.8 0.0038 P10.5 crx+ retina TCAGTTTAAG 1.9 0.0019 P10.5 crx+ retina TGCTGAAAAT (3) 1.9 0.0019 Adult retinal AGCGTCTGCA (15) 42.6 0.0426 Adult retinal CTCTTGGCTG (2) 1.9 0.0019 Adult retinal TCAGTTTAAG 1.9 0.0019 ONL AGCGTCTGCA (15) 67 0.067 ONL TCAGTTTAAG 5.7 0.0057