Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.200763	Lrch4	leucine-rich repeats and calponin homology (CH) domain containing 4	5		231798
Human Homolog	LRCH4[leucine-rich repeats and calponin homology (CH) domain containing 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCTGCTTC (4) 4.9 0.0049 P8 Cb GC GGCCCCTGGC (2) 1.6 0.0016 P8 Cb GC TGTCAGTCCC (3) 1.6 0.0016 Cb medulloblastoma GGGGGAGGGG (18) 2.3 0.0023 Cb medulloblastoma TGTCAGTCCC (3) 2.3 0.0023 P8 GC+1d culture CTGCTGCTTC (4) 3.4 0.0034 P8 GC+1d culture GGGGGAGGGG (18) 2.3 0.0023 P8 GC+1d culture GTCTTGTGTG (2) 1.1 0.0011 P8 GC+SHH+1d culture CTGCTGCTTC (4) 4.7 0.0047 P8 GC+SHH+1d culture AAGGAGCAAG 2.3 0.0023 P8 GC+SHH+1d culture AACCACATAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGAGATGGT (4) 1.2 0.0012 3T3 fibroblasts CTGCTGCTTC (4) 14 0.014 3T3 fibroblasts GTCTTGTGTG (2) 7 0.007 3T3 fibroblasts CTGCTGCTCT (9) 3.5 0.0035 3T3 fibroblasts GGGGGAGGGG (18) 3.5 0.0035 3T3 fibroblasts TGTCAGTCCC (3) 3.5 0.0035 E15 cortex GGCCCCTGGC (2) 4.9 0.0049 P1 cortex CTGCTGCTCT (9) 4.5 0.0045 P1 cortex CTGCTGCTTC (4) 4.5 0.0045 P1 cortex GGGGGAGGGG (18) 4.5 0.0045 Hypothalamus GTCACCAAGT 1.8 0.0018 E12.5 retina CTGCTGCTTC (4) 11.3 0.0113 E12.5 retina AACCACATAG (2) 3.8 0.0038 E12.5 retina GGGGGAGGGG (18) 3.8 0.0038 E12.5 retina CTGCTGCTCT (9) 1.9 0.0019 E12.5 retina GTCTTGTGTG (2) 1.9 0.0019 E14.5 retina AACCACATAG (2) 3.6 0.0036 E14.5 retina CTGCTGCTTC (4) 3.6 0.0036 E14.5 retina TGTCAGTCCC (3) 3.6 0.0036 E14.5 retina AACCCAGACT (6) 1.8 0.0018 E14.5 retina GTGAGATGGT (4) 1.8 0.0018 E16.5 retina AACCACATAG (2) 3.6 0.0036 E16.5 retina CTGCTGCTTC (4) 3.6 0.0036 E16.5 retina CTGCTGCTCT (9) 1.8 0.0018 E18.5 retina CTGCTGCTTC (4) 12.7 0.0127 E18.5 retina GGGGGAGGGG (18) 1.8 0.0018 P0.5 retina CTGCTGCTTC (4) 9.8 0.0098 P0.5 retina TGTCAGTCCC (3) 3.9 0.0039 P0.5 retina AACCACATAG (2) 2 0.002 P0.5 retina AACCCAGACT (6) 2 0.002 P2.5 retina CTGCTGCTTC (4) 10.6 0.0106 P2.5 retina GGGGGAGGGG (18) 1.8 0.0018 P2.5 retina GTCTTGTGTG (2) 1.8 0.0018 P2.5 retina TGTCAGTCCC (3) 1.8 0.0018 P4.5 retina CTGCTGCTTC (4) 4 0.004 P4.5 retina AACCACATAG (2) 2 0.002 P6.5 retina CTGCTGCTTC (4) 10 0.01 P6.5 retina AACCACATAG (2) 3.3 0.0033 P6.5 retina GGGGGAGGGG (18) 1.7 0.0017 P6.5 retina GTCTTGTGTG (2) 1.7 0.0017 P6.5 retina GTGAGATGGT (4) 1.7 0.0017 P10.5 crx- retina ACAGTCTGTT (6) 5.6 0.0056 P10.5 crx- retina CTGCTGCTTC (4) 3.7 0.0037 P10.5 crx- retina GGGGGAGGGG (18) 1.9 0.0019 P10.5 crx- retina GTCACCAAGT 1.9 0.0019 P10.5 crx+ retina CTGCTGCTTC (4) 3.8 0.0038 P10.5 crx+ retina AACCACATAG (2) 1.9 0.0019 P10.5 crx+ retina GGGGGAGGGG (18) 1.9 0.0019 P10.5 crx+ retina GTCACCAAGT 1.9 0.0019 P10.5 crx+ retina TGTCAGTCCC (3) 1.9 0.0019 Adult retinal AACCACATAG (2) 7.4 0.0074 Adult retinal CTGCTGCTTC (4) 7.4 0.0074 Adult retinal GGGGGAGGGG (18) 1.9 0.0019 Adult retinal GTCACCAAGT 1.9 0.0019 Adult retinal TGTCAGTCCC (3) 1.9 0.0019 ONL GTCTTGTGTG (2) 3.8 0.0038 ONL AACCCAGACT (6) 1.9 0.0019 ONL AAGGAGCAAG 1.9 0.0019