Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.200783	Ssx2ip	synovial sarcoma, X breakpoint 2 interacting protein	3		99167
Gene Ontology	biological_process unknown | cellular_component unknown | protein binding
Human Homolog	SSX2IP[synovial sarcoma, X breakpoint 2 interacting protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGAATTAGA (3) 4.9 0.0049 P8 Cb GC CCATTCAAAA (3) 1.6 0.0016 Cb medulloblastoma CTACCAAAAA (4) 6.9 0.0069 Cb medulloblastoma CTACTAAAAA (2) 2.3 0.0023 P8 GC+1d culture AGGAATTAGA (3) 4.6 0.0046 P8 GC+1d culture CTACCAAAAA (4) 2.3 0.0023 P8 GC+1d culture TTGTGACCAG (4) 1.1 0.0011 P8 GC+SHH+1d culture AGGAATTAGA (3) 8.2 0.0082 P8 GC+SHH+1d culture TTGTGACCAG (4) 3.5 0.0035 P8 GC+SHH+1d culture CTACCAAAAA (4) 2.3 0.0023 P8 GC+SHH+1d culture CTACCAAAAG 1.2 0.0012 P8 GC+SHH+1d culture TGTGTCTGAA (5) 1.2 0.0012 3T3 fibroblasts TTGTGACCAG (4) 3.5 0.0035 Hypothalamus CTACCAAAAG 5.4 0.0054 Hypothalamus ACTATGTTAA (3) 1.8 0.0018 Hypothalamus CTACTAAAAA (2) 1.8 0.0018 E12.5 retina CTACCAAAAA (4) 5.6 0.0056 E12.5 retina AGGAATTAGA (3) 1.9 0.0019 E14.5 retina AGGAATTAGA (3) 3.6 0.0036 E14.5 retina CTACCAAAAA (4) 3.6 0.0036 E14.5 retina CTACCAAAAG 1.8 0.0018 E14.5 retina CTACTAAAAA (2) 1.8 0.0018 E16.5 retina CTACCAAAAA (4) 3.6 0.0036 E16.5 retina ACTATGTTAA (3) 1.8 0.0018 E18.5 retina CTACCAAAAA (4) 7.3 0.0073 E18.5 retina AGGAATTAGA (3) 3.6 0.0036 E18.5 retina TTGTGACCAG (4) 3.6 0.0036 P0.5 retina CTACCAAAAA (4) 7.9 0.0079 P2.5 retina CTACCAAAAG 7 0.007 P2.5 retina ACTATGTTAA (3) 1.8 0.0018 P2.5 retina CTACCAAAAA (4) 1.8 0.0018 P2.5 retina TGTGTCTGAA (5) 1.8 0.0018 P4.5 retina CTACCAAAAA (4) 4 0.004 P4.5 retina ACTATGTTAA (3) 2 0.002 P4.5 retina CTACCAAAAG 2 0.002 P6.5 retina CTACCAAAAA (4) 3.3 0.0033 P6.5 retina CCATTCAAAA (3) 1.7 0.0017 P6.5 retina CTACCAAAAG 1.7 0.0017 P6.5 retina TTGTGACCAG (4) 1.7 0.0017 P10.5 crx- retina CTACCAAAAA (4) 3.7 0.0037 P10.5 crx- retina CCATTCAAAA (3) 1.9 0.0019 P10.5 crx+ retina CTACCAAAAG 7.7 0.0077 P10.5 crx+ retina CTACCAAAAA (4) 1.9 0.0019 P10.5 crx+ retina TTGTGACCAG (4) 1.9 0.0019 Adult retinal CTACCAAAAA (4) 7.4 0.0074 Adult retinal TTGTGACCAG (4) 1.9 0.0019 ONL CTACCAAAAA (4) 3.8 0.0038 ONL TGTGTCTGAA (5) 1.9 0.0019