Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.20129
Pspc1
paraspeckle protein 1
14
66645
Mm.20129
C030013D06Rik
RIKEN cDNA C030013D06 gene
14
77376
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTCCCACCC (
4
)
4.9
0.0049
P8 Cb GC
GGGGTTAAGA
(
5
)
3.3
0.0033
P8 Cb GC
GGAAAATAAA (
15
)
1.6
0.0016
P8 Cb GC
GGAGATGCAT
(
5
)
1.6
0.0016
P8 Cb GC
TAATAAAGAA (
4
)
1.6
0.0016
P8 Cb GC
TCTGTTACTA
(
3
)
1.6
0.0016
Cb medulloblastoma
CCTCCCACCC (
4
)
6.9
0.0069
Cb medulloblastoma
GGAGATGCAT
(
5
)
2.3
0.0023
Cb medulloblastoma
GGGGTTAAGA
(
5
)
2.3
0.0023
Cb medulloblastoma
TAATAAAGAA (
4
)
2.3
0.0023
P8 GC+1d culture
GGAGATGCAT
(
5
)
9.1
0.0091
P8 GC+1d culture
CCTCCCACCC (
4
)
4.6
0.0046
P8 GC+1d culture
GGGGTTAAGA
(
5
)
3.4
0.0034
P8 GC+1d culture
TCTGTTACTA
(
3
)
3.4
0.0034
P8 GC+1d culture
CTCAAGGCCC
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GGAGATGCAT
(
5
)
4.7
0.0047
P8 GC+SHH+1d culture
TAATAAAGAA (
4
)
1.2
0.0012
3T3 fibroblasts
CCTCCCACCC (
4
)
3.5
0.0035
E15 cortex
CCTCCCACCC (
4
)
4.9
0.0049
P1 cortex
CCTCCCACCC (
4
)
4.5
0.0045
P1 cortex
TAATAAAGAA (
4
)
4.5
0.0045
P1 cortex
TCTGTTACTA
(
3
)
4.5
0.0045
Hypothalamus
CCTCCCACCC (
4
)
3.6
0.0036
Hypothalamus
GGGGTTAAGA
(
5
)
3.6
0.0036
Hypothalamus
GGAAAATAAA (
15
)
1.8
0.0018
Hypothalamus
GGAGATGCAT
(
5
)
1.8
0.0018
Hypothalamus
TAATAAAGAA (
4
)
1.8
0.0018
E12.5 retina
CCTCCCACCC (
4
)
9.4
0.0094
E12.5 retina
TAATAAAGAA (
4
)
3.8
0.0038
E12.5 retina
GGGGTTAAGA
(
5
)
1.9
0.0019
E12.5 retina
TCTGTTACTA
(
3
)
1.9
0.0019
E14.5 retina
CTCAAGGCCC
(
6
)
1.8
0.0018
E14.5 retina
GGGGTTAAGA
(
5
)
1.8
0.0018
E14.5 retina
TCTGTTACTA
(
3
)
1.8
0.0018
E16.5 retina
CCTCCCACCC (
4
)
10.9
0.0109
E18.5 retina
GGGGTTAAGA
(
5
)
5.5
0.0055
E18.5 retina
CCTCCCACCC (
4
)
3.6
0.0036
E18.5 retina
TAATAAAGAA (
4
)
1.8
0.0018
P0.5 retina
CTCAAGGCCC
(
6
)
3.9
0.0039
P0.5 retina
CCTCCCACCC (
4
)
2
0.002
P2.5 retina
CCTCCCACCC (
4
)
1.8
0.0018
P2.5 retina
GGAAAATAAA (
15
)
1.8
0.0018
P2.5 retina
GGGGTTAAGA
(
5
)
1.8
0.0018
P4.5 retina
CCTCCCACCC (
4
)
4
0.004
P4.5 retina
GGGGTTAAGA
(
5
)
4
0.004
P4.5 retina
TAATAAAGAA (
4
)
4
0.004
P6.5 retina
CTCAAGGCCC
(
6
)
1.7
0.0017
P6.5 retina
TCTGTTACTA
(
3
)
1.7
0.0017
P10.5 crx- retina
CCTCCCACCC (
4
)
1.9
0.0019
P10.5 crx- retina
CTCAAGGCCC
(
6
)
1.9
0.0019
P10.5 crx- retina
TAATAAAGAA (
4
)
1.9
0.0019
P10.5 crx+ retina
CCTCCCACCC (
4
)
5.8
0.0058
P10.5 crx+ retina
TAATAAAGAA (
4
)
1.9
0.0019
P10.5 crx+ retina
TCTGTTACTA
(
3
)
1.9
0.0019
Adult retinal
CCTCCCACCC (
4
)
3.7
0.0037
Adult retinal
GGGGTTAAGA
(
5
)
3.7
0.0037
Adult retinal
GGAGATGCAT
(
5
)
1.9
0.0019
Adult retinal
TCTGTTACTA
(
3
)
1.9
0.0019
ONL
TAATAAAGAA (
4
)
1.9
0.0019
