Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.201859
Fance
Fanconi anemia, complementation group E
17
17 A3.3
72775
Human Homolog
FANCE[Fanconi anemia, complementation group E]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 8 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
GGGCTGGGGA (
7
)
3.3
0.0033
P8 Cb GC
CTCTGTGGGA (
2
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
CTCTGTGGGA (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
TGACCCACTG
(
2
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
TGACCCACTG
(
2
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
CTCTGTGGGA (
2
)
9.9
0.0099
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
GGGCTGGGGA (
7
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
GGGCTGGGGA (
7
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
CTCTGTGGGA (
2
)
7.3
0.0073
E14.5 retina
GGGCTGGGGA (
7
)
5.5
0.0055
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
GGGCTGGGGA (
7
)
3.6
0.0036
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
GGGCTGGGGA (
7
)
16.4
0.0164
E18.5 retina
CTCTGTGGGA (
2
)
3.6
0.0036
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
CTCTGTGGGA (
2
)
2
0.002
P0.5 retina
GCGGCACACA (
3
)
2
0.002
P0.5 retina
TGACCCACTG
(
2
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
CTCTGTGGGA (
2
)
1.8
0.0018
P2.5 retina
GGGCTGGGGA (
7
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
GCGGCACACA (
3
)
2
0.002
P4.5 retina
TGACCCACTG
(
2
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
GCGGCACACA (
3
)
3.3
0.0033
P6.5 retina
TGACCCACTG
(
2
)
3.3
0.0033
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
TGACCCACTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
TGACCCACTG
(
2
)
3.8
0.0038
P10.5 crx+ retina
CTCTGTGGGA (
2
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
TGACCCACTG
(
2
)
9.3
0.0093
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
GGGCTGGGGA (
7
)
23
0.023
ONL
TGACCCACTG
(
2
)
9.6
0.0096
ONL
GCGGCACACA (
3
)
3.8
0.0038
