Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2025	Smn1	survival motor neuron 1	13	13 D1/D2.1 (13 54.0 cM)	20595
Gene Ontology	cytoplasm | mRNA processing | nucleic acid binding | nucleus | RNA binding
Human Homolog	SMN1[survival of motor neuron 1, telomeric]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 17 In Situ Hybridization Images

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SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAAGATTTT (2) 4.9 0.0049 P8 Cb GC AGTGGCTACC (2) 1.6 0.0016 P8 Cb GC TTTGTGTGTG (9) 1.6 0.0016 Cb medulloblastoma TCAAGATTTT (2) 6.9 0.0069 Cb medulloblastoma AGTGGCTACC (2) 2.3 0.0023 Cb medulloblastoma TTTGTGTGTG (9) 2.3 0.0023 P8 GC+1d culture TCAAGATTTT (2) 4.6 0.0046 P8 GC+SHH+1d culture TCAAGATTTT (2) 3.5 0.0035 P8 GC+SHH+1d culture TTTGTGTGTG (9) 1.2 0.0012 3T3 fibroblasts TGCAGGCTGG (3) 10.5 0.0105 3T3 fibroblasts AGTGGCTACC (2) 3.5 0.0035 E15 cortex AGTGGCTACC (2) 4.9 0.0049 P1 cortex TTTGTGTGTG (9) 4.5 0.0045 Hypothalamus TCAAGATTTT (2) 9.1 0.0091 E12.5 retina TCAAGATTTT (2) 7.5 0.0075 E12.5 retina TTTGTGTGTG (9) 3.8 0.0038 E12.5 retina AGTGGCTACC (2) 1.9 0.0019 E14.5 retina TCAAGATTTT (2) 12.8 0.0128 E16.5 retina TCAAGATTTT (2) 9.1 0.0091 E18.5 retina TCAAGATTTT (2) 9.1 0.0091 P2.5 retina TCAAGATTTT (2) 8.8 0.0088 P2.5 retina CTAAGAAAAT (8) 1.8 0.0018 P2.5 retina TTTGTGTGTG (9) 1.8 0.0018 P4.5 retina TCAAGATTTT (2) 7.9 0.0079 P4.5 retina TGCAGGCTGG (3) 2 0.002 P4.5 retina TTTGTGTGTG (9) 2 0.002 P6.5 retina TCAAGATTTT (2) 3.3 0.0033 P6.5 retina CTAAGAAAAT (8) 1.7 0.0017 P10.5 crx- retina TCAAGATTTT (2) 5.6 0.0056 P10.5 crx- retina CTAAGAAAAT (8) 3.7 0.0037 Adult retinal AGTGGCTACC (2) 1.9 0.0019 Adult retinal TTTGTGTGTG (9) 1.9 0.0019 ONL TTTGTGTGTG (9) 5.7 0.0057